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08E140C01_scaffold_1001_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_1001_curated_1
unknown

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comp(2..238)
DNA (237bp) protein (79aa)
Putative uncharacterized protein id=4352486 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_1001_curated_2
unknown

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comp(265..1053)
DNA (789bp) protein (263aa)
Putative uncharacterized protein id=4352487 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein rbh
08E140C01_scaffold_1001_curated_3
unknown

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comp(1050..3383)
DNA (2334bp) protein (778aa)
Putative uncharacterized protein id=4352488 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein rbh
08E140C01_scaffold_1001_curated_4
unknown

Not on your lists

comp(3461..4042)
DNA (582bp) protein (194aa)
Regulatory protein TetR id=4352489 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
regulatory protein TetR
08E140C01_scaffold_1001_curated_5
unknown

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4221..7103
DNA (2883bp) protein (961aa)
Hpt sensor hybrid histidine kinase id=4352490 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Hpt sensor hybrid histidine kinase rbh
08E140C01_scaffold_1001_curated_6
unknown

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7195..8679
DNA (1485bp) protein (495aa)
Putative uncharacterized protein id=4352491 bin=GWC2_Spirochaete_52_13 species=Synergistes sp. 3_1_syn1 genus=Synergistes taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein rbh
08E140C01_scaffold_1001_curated_7
unknown

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8683..9237
DNA (555bp) protein (185aa)
Phosphodiesterase family protein id=4352492 bin=GWC2_Spirochaete_52_13 species=Dorea formicigenerans genus=Dorea taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
phosphoesterase, MJ0936 family
08E140C01_scaffold_1001_curated_8
unknown

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9351..10097
DNA (747bp) protein (249aa)
Transcriptional regulator, GntR family with UTRA sensor domain id=4352496 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
GntR family transcriptional regulator
08E140C01_scaffold_1001_curated_9
unknown

Not on your lists

10373..12307
DNA (1935bp) protein (645aa)
AMP-forming long-chain acyl-CoA synthetase id=4352498 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
AMP-forming long-chain acyl-CoA synthetase rbh
08E140C01_scaffold_1001_curated_10
unknown

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comp(12311..12700)
DNA (390bp) protein (130aa)
Putative uncharacterized protein id=4352500 bin=GWC2_Spirochaete_52_13 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
ferric uptake regulator; K09825 Fur family transcriptional regulator, peroxide stress response regulator
08E140C01_scaffold_1001_curated_11
unknown

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comp(12666..13094)
DNA (429bp) protein (143aa)
Putative uncharacterized protein id=4352502 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein; K09790 hypothetical protein
08E140C01_scaffold_1001_curated_12
unknown

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13333..14553
DNA (1221bp) protein (407aa)
Putative uncharacterized protein id=4352504 bin=GWC2_Spirochaete_52_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_1001_curated_13
unknown

Not on your lists

14566..15822
DNA (1257bp) protein (419aa)
Putative uncharacterized protein id=4352506 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein rbh
08E140C01_scaffold_1001_curated_14
unknown

Not on your lists

16029..17645
DNA (1617bp) protein (539aa)
Na+/H+ antiporter id=4352508 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Na+/H+ antiporter rbh
08E140C01_scaffold_1001_curated_15
unknown

Not on your lists

17696..18898
DNA (1203bp) protein (401aa)
mannose-6-phosphate isomerase; K01809 mannose-6-phosphate isomerase [EC:5.3.1.8] rbh
Mannose-6-phosphate isomerase, class I id=4352511 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_1001_curated_16
unknown

Not on your lists

18944..20254
DNA (1311bp) protein (437aa)
UPF0597 protein SpiGrapes_1156 id=4352514 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein rbh
08E140C01_scaffold_1001_curated_17
unknown

Not on your lists

20251..20856
DNA (606bp) protein (202aa)
DNA polymerase III, epsilon subunit; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III, epsilon subunit id=4352516 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_1001_curated_18
unknown

Not on your lists

20947..21489
DNA (543bp) protein (181aa)
Rubrerythrin id=4352518 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Rubrerythrin
08E140C01_scaffold_1001_curated_19
unknown

Not on your lists

comp(21621..22916)
DNA (1296bp) protein (432aa)
TRAP transporter, DctM subunit id=4352521 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
TRAP transporter subunit DctM rbh
08E140C01_scaffold_1001_curated_20
unknown

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comp(22909..23436)
DNA (528bp) protein (176aa)
TRAP-type C4-dicarboxylate transport system, small permease component id=4352567 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
TRAP-type C4-dicarboxylate transport system, small permease component
08E140C01_scaffold_1001_curated_21
unknown

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comp(23534..24532)
DNA (999bp) protein (333aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family id=4352570 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
TRAP dicarboxylate family transporter subunit DctP rbh
08E140C01_scaffold_1001_curated_22
unknown

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comp(24662..26164)
DNA (1503bp) protein (501aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain id=4352571 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; K07720 two-component system, response regulator YesN rbh
08E140C01_scaffold_1001_curated_23
unknown

Not on your lists

comp(26166..27671)
DNA (1506bp) protein (502aa)
Putative regulator of cell autolysis id=4352573 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
putative regulator of cell autolysis rbh
08E140C01_scaffold_1001_curated_24
unknown

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comp(27683..28792)
DNA (1110bp) protein (370aa)
Aldo/keto reductase id=4352575 bin=GWC2_Spirochaete_52_13 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
aldo/keto reductase rbh
08E140C01_scaffold_1001_curated_25
unknown

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comp(28887..31373)
DNA (2487bp) protein (829aa)
NAD(FAD)-dependent dehydrogenase id=4352577 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
NAD(FAD)-dependent dehydrogenase rbh
08E140C01_scaffold_1001_curated_26
unknown

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comp(31370..31756)
DNA (387bp) protein (129aa)
Regulatory protein MarR id=4352579 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
regulatory protein MarR
Displaying 26 items

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