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08E140C01_scaffold_296_curated

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Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_296_curated_1
unknown

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3..491
DNA (489bp) protein (163aa)
Putative uncharacterized protein id=4414870 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_296_curated_2
unknown

Not on your lists

comp(492..1505)
DNA (1014bp) protein (338aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24); K02032 peptide/nickel transport system ATP-binding protein rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit id=4414868 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_296_curated_3
unknown

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comp(1498..2517)
DNA (1020bp) protein (340aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24); K15583 oligopeptide transport system ATP-binding protein rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit id=4414866 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_296_curated_4
unknown

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comp(2530..4140)
DNA (1611bp) protein (537aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=4414864 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
dipeptide/oligopeptide/nickel ABC transporter permease; K15582 oligopeptide transport system permease protein rbh
08E140C01_scaffold_296_curated_5
unknown

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comp(4156..5085)
DNA (930bp) protein (310aa)
Binding-protein-dependent transport systems inner membrane component id=4414862 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
binding-protein-dependent transport systems inner membrane component; K15581 oligopeptide transport system permease protein rbh
08E140C01_scaffold_296_curated_6
unknown

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5681..6361
DNA (681bp) protein (227aa)
id=4414860 bin=GWC2_Spirochaete_52_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_296_curated_7
unknown

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6501..7865
DNA (1365bp) protein (455aa)
ribosomal protein S12 methylthiotransferase RimO; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] rbh
Ribosomal protein S12 methylthiotransferase RimO id=4912767 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_296_curated_8
unknown

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7862..10126
DNA (2265bp) protein (755aa)
DNA/RNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
DNA/RNA helicase, superfamily I id=4912768 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_296_curated_9
unknown

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10128..10973
DNA (846bp) protein (282aa)
Glutamate-1-semialdehyde aminotransferase id=4912769 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
glutamate-1-semialdehyde aminotransferase
08E140C01_scaffold_296_curated_10
unknown

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11084..11512
DNA (429bp) protein (143aa)
50S ribosomal protein L13 id=4912770 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
08E140C01_scaffold_296_curated_11
unknown

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11528..11944
DNA (417bp) protein (139aa)
30S ribosomal protein S9 id=4912771 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
30S ribosomal protein S9P; K02996 small subunit ribosomal protein S9
08E140C01_scaffold_296_curated_12
unknown

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11960..12565
DNA (606bp) protein (202aa)
Regulatory protein RecX id=4912772 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein; K03565 regulatory protein
08E140C01_scaffold_296_curated_13
unknown

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comp(12634..13932)
DNA (1299bp) protein (433aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] rbh
Enolase id=4912774 bin=GWC2_Spirochaete_52_13 species=unknown genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_296_curated_14
unknown

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14043..15029
DNA (987bp) protein (329aa)
GCN5-related N-acetyltransferase id=4912775 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
GCN5-related N-acetyltransferase
08E140C01_scaffold_296_curated_15
unknown

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15287..16615
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHR5_SPICD rbh
hypothetical protein rbh
08E140C01_scaffold_296_curated_16
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17236..17544
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5YMU0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA17907.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
transcriptional regulator
08E140C01_scaffold_296_curated_17
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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17541..18740
DNA (1200bp) protein (400aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] rbh
HipA domain protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LT62_DESBD rbh
HipA domain protein {ECO:0000313|EMBL:ACU88286.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
08E140C01_scaffold_296_curated_18
unknown

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18953..19390
DNA (438bp) protein (146aa)

This feature has no annotations

08E140C01_scaffold_296_curated_19
unknown

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comp(19474..21717)
DNA (2244bp) protein (748aa)
rRNA (guanine-N(2)-)-methyltransferase (EC:2.1.1.171); K12297 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] rbh
rRNA (Guanine-N(2)-)-methyltransferase id=3857882 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_296_curated_20
unknown

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comp(21727..22650)
DNA (924bp) protein (308aa)
Disulfide bond chaperone id=3857883 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
disulfide bond chaperone; K04083 molecular chaperone Hsp33 rbh
08E140C01_scaffold_296_curated_21
unknown

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comp(22662..24632)
DNA (1971bp) protein (657aa)
ATP-dependent metalloprotease FtsH (EC:3.6.1.3); K03798 cell division protease FtsH [EC:3.4.24.-] rbh
ATP-dependent zinc metalloprotease FtsH id=3857884 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_296_curated_22
unknown

Not on your lists

24733..25473
DNA (741bp) protein (247aa)
dehydrogenase; K03793 pteridine reductase [EC:1.5.1.33]
Putative uncharacterized protein id=3857885 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
08E140C01_scaffold_296_curated_23
unknown

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25710..27152
DNA (1443bp) protein (481aa)
Putative uncharacterized protein id=3857971 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_296_curated_24
unknown

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27174..28337
DNA (1164bp) protein (388aa)
Efflux transporter, RND family, MFP subunit id=3857972 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
RND family efflux transporter, MFP subunit rbh
08E140C01_scaffold_296_curated_25
unknown

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28349..29023
DNA (675bp) protein (225aa)
ABC-type antimicrobial peptide transport system, ATPase component id=3857973 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
antimicrobial peptide ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein rbh
08E140C01_scaffold_296_curated_26
unknown

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29024..30205
DNA (1182bp) protein (394aa)
ABC-type antimicrobial peptide transport system, permease component id=3857974 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
antimicrobial peptide ABC transporter permease; K02004 putative ABC transport system permease protein rbh
08E140C01_scaffold_296_curated_27
unknown

Not on your lists

30198..31502
DNA (1305bp) protein (435aa)
Signal transduction histidine kinase id=3857977 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
signal transduction histidine kinase rbh
08E140C01_scaffold_296_curated_28
unknown

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31512..32882
DNA (1371bp) protein (457aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains id=3857984 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains rbh
08E140C01_scaffold_296_curated_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33239..34147
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI00037D37C3
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEV97097.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
08E140C01_scaffold_296_curated_30
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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34298..35785
DNA (1488bp) protein (496aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17) rbh
ABC transporter, ATP-binding protein n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U1FKK9_TRESO rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERF60343.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536.;"
Displaying items 1-30 of 83 in total

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