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08E140C01_scaffold_5503_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_scaffold_5503_curated_trna_2
unknown

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comp(151..224)
DNA (74bp)
transferRNA
08E140C01_scaffold_5503_curated_trna_1
unknown

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comp(236..308)
DNA (73bp)
transferRNA
08E140C01_scaffold_5503_curated_1
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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411..1052
DNA (642bp) protein (214aa)
putative endoIII-related endonuclease; K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Endonuclease III n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QSZ3_SPHPG
08E140C01_scaffold_5503_curated_2
unknown

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comp(1056..1394)
DNA (339bp) protein (113aa)
dinitrogenase iron-molybdenum cofactor biosynthesis id=17413777 bin=RBG_16_Aminicenantes_63_14 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
08E140C01_scaffold_5503_curated_3
unknown

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comp(1391..2590)
DNA (1200bp) protein (400aa)
ATPase-like, ParA/MinD id=4273642 bin=GWF2_Lentisphaerae_38_69 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
cobyrinic acid ac-diamide synthase
08E140C01_scaffold_5503_curated_4
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2575..3468)
DNA (894bp) protein (298aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AQE0_PELPD rbh
cobyrinic acid a,c-diamide synthase rbh
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:ABK99560.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
08E140C01_scaffold_5503_curated_5
unknown

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comp(3461..4324)
DNA (864bp) protein (288aa)
hypothetical protein
MinD family ATPase id=7201565 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
08E140C01_scaffold_5503_curated_6
unknown

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comp(4321..4683)
DNA (363bp) protein (121aa)
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifB/NifX-related protein id=2540944 bin=GWC2_Spirochaete_52_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_5503_curated_7
unknown

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comp(4680..4961)
DNA (282bp) protein (94aa)
Uncharacterized protein id=2540947 bin=GWC2_Spirochaete_52_13 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_5503_curated_8
unknown

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comp(5016..5429)
DNA (414bp) protein (138aa)
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifB/NifX-related protein, iron-sulfur cluster-binding protein id=2540948 bin=GWC2_Spirochaete_52_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
08E140C01_scaffold_5503_curated_9
unknown

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comp(5656..7020)
DNA (1365bp) protein (455aa)
Sigma54 specific transcriptional regulator, Fis family id=2540953 bin=GWC2_Spirochaete_52_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
PAS modulated sigma54 specific transcriptional regulator, Fis family rbh
08E140C01_scaffold_5503_curated_10
unknown

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comp(7067..7759)
DNA (693bp) protein (231aa)
Transcriptional regulator id=2540958 bin=GWC2_Spirochaete_52_13 species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
transcriptional regulator
Displaying 12 items

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