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bjp_ig2069_scaffold_29_curated

Search features with annotation key words

Displaying items 1-30 of 451 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2069_scaffold_29_curated_1
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..600
DNA (600bp) protein (200aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionyl-tRNA synthetase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JGC8_9CLOT
Methionyl-tRNA synthetase {ECO:0000313|EMBL:AEY64505.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
bjp_ig2069_scaffold_29_curated_2
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

671..1822
DNA (1152bp) protein (384aa)
glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] rbh
Glutamate--tRNA ligase 2 {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase 2 {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS 2 {ECO:0000255|HAMAP-Rule:MF_00022};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Glutamate--tRNA ligase 2 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=SYE2_SYNAS rbh
bjp_ig2069_scaffold_29_curated_3
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1885..2979)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HRD6_CYAP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL44124.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
bjp_ig2069_scaffold_29_curated_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3111..4484)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036D6E3F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63362.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
bjp_ig2069_scaffold_29_curated_5
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4510..5583)
DNA (1074bp) protein (358aa)
Heme biosynthesis protein {ECO:0000313|EMBL:CDM70318.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Heme biosynthesis protein id=3098636 bin=GWC2_Planctomycete_KSU_39_26 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
radical SAM domain-containing protein
bjp_ig2069_scaffold_29_curated_6
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5622..6308)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00036D8ECD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AFY33787.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
bjp_ig2069_scaffold_29_curated_7
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(6353..7033)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00036D8ECD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AFY33787.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
bjp_ig2069_scaffold_29_curated_8
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(7042..8826)
DNA (1785bp) protein (595aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00035D5DD8 rbh
HPr kinase
HPr kinase {ECO:0000313|EMBL:ACL45677.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
bjp_ig2069_scaffold_29_curated_9
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8869..10026)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003658B78
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY61114.1}; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
bjp_ig2069_scaffold_29_curated_10
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10054..10512)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034AAEAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ15629.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
bjp_ig2069_scaffold_29_curated_11
unknown

Not on your lists

comp(10733..11116)
DNA (384bp) protein (128aa)
Putative uncharacterized protein id=1353826 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
h16_A3595; hypothetical protein
bjp_ig2069_scaffold_29_curated_12
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11153..12256)
DNA (1104bp) protein (368aa)
strictosidine synthase, conserved region n=1 Tax=Acidovorax radicis RepID=UPI0002378660 rbh
Gluconolactonase {ECO:0000313|EMBL:EJL81972.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
strictosidine synthase rbh
bjp_ig2069_scaffold_29_curated_13
unknown

Not on your lists

comp(12307..13878)
DNA (1572bp) protein (524aa)
methylmalonyl-CoA decarboxylase subunit alpha (EC:4.1.1.41); K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3] rbh
Methylmalonyl-CoA decarboxylase, alpha-subunit id=4794620 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_29_curated_14
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14226..14855
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4FI75_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:ESP62859.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
hypothetical protein
bjp_ig2069_scaffold_29_curated_15
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14947..15486)
DNA (540bp) protein (180aa)
GCN5-related N-acetyltransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LI75_SYNFM
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABK17127.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
bjp_ig2069_scaffold_29_curated_16
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15710..17812
DNA (2103bp) protein (701aa)
CoA-binding domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FIP4_DESAA rbh
CoA-binding domain-containing protein rbh
CoA-binding domain protein {ECO:0000313|EMBL:ACL04285.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
bjp_ig2069_scaffold_29_curated_17
unknown

Not on your lists

comp(17899..19113)
DNA (1215bp) protein (405aa)
dinB; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] rbh
DNA polymerase IV id=3729147 bin=GWC2_Syntrophus__56_31 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_29_curated_18
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19125..19376)
DNA (252bp) protein (84aa)
Putative cytosolic protein n=1 Tax=Smithella sp. ME-1 RepID=V4F8D4_9DELT
Putative cytosolic protein {ECO:0000313|EMBL:ESP62660.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
hypothetical protein; K09898 hypothetical protein
bjp_ig2069_scaffold_29_curated_19
unknown

Not on your lists

19627..20049
DNA (423bp) protein (141aa)
hypothetical protein id=128416 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
hypothetical protein
bjp_ig2069_scaffold_29_curated_20
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20083..22053)
DNA (1971bp) protein (657aa)
1A family penicillin-binding protein (EC:2.4.1.129) rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ABQ26609.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABQ26609.1};; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Penicillin-binding protein, 1A family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G491_GEOUR rbh
bjp_ig2069_scaffold_29_curated_21
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22193..23017)
DNA (825bp) protein (275aa)
Nitroreductase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J524_DESRM
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ABO50177.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
bjp_ig2069_scaffold_29_curated_22
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23122..23445)
DNA (324bp) protein (108aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21); K11312 cupin 2 domain-containing protein
Phosphoribosylaminoimidazole carboxylase ATPase subunit {ECO:0000313|EMBL:ABC78662.1}; EC=4.1.1.21 {ECO:0000313|EMBL:ABC78662.1};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Phosphoribosylaminoimidazole carboxylase ATPase subunit n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LX48_SYNAS
bjp_ig2069_scaffold_29_curated_23
unknown

Not on your lists

23628..23825
DNA (198bp) protein (66aa)

This feature has no annotations

bjp_ig2069_scaffold_29_curated_24

Not on your lists

23859..24662
DNA (804bp) protein (268aa)
cyclase n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B40A97 rbh
Marine sediment metagenome DNA, contig: S01H4_C03658 {ECO:0000313|EMBL:GAG59612.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cyclase family protein rbh
bjp_ig2069_scaffold_29_curated_25
unknown

Not on your lists

25128..25322
DNA (195bp) protein (65aa)
Hypothetical exported protein id=4397900 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig2069_scaffold_29_curated_26
unknown

Not on your lists

25637..25873
DNA (237bp) protein (79aa)
Hypothetical membrane protein id=3710102 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
bjp_ig2069_scaffold_29_curated_27
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25974..26576
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Marinobacter lipolyticus RepID=UPI00036B226B
Uncharacterized protein {ECO:0000313|EMBL:CDA77967.1}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
bjp_ig2069_scaffold_29_curated_28
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26682..27452)
DNA (771bp) protein (257aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Smithella sp. ME-1 RepID=V4F9R8_9DELT rbh
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ESP63105.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
LytTR family two component transcriptional regulator
bjp_ig2069_scaffold_29_curated_29
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27442..28515)
DNA (1074bp) protein (358aa)
Autolysin sensor kinase {ECO:0000313|EMBL:ESP63106.1}; EC=2.7.3.- {ECO:0000313|EMBL:ESP63106.1};; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
Autolysin sensor kinase n=1 Tax=Smithella sp. ME-1 RepID=V4EQS5_9DELT rbh
signal transduction histidine kinase LytS
bjp_ig2069_scaffold_29_curated_30
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28676..28927)
DNA (252bp) protein (84aa)
Acyl carrier protein n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RZ25_9DELT
Acyl carrier protein {ECO:0000256|RuleBase:RU003545}; TaxID=1353530 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
putative acyl carrier protein
Displaying items 1-30 of 451 in total

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