ggKbase home page

bjp_ig2069_scaffold_35_curated

Search features with annotation key words

Displaying items 1-30 of 782 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2069_scaffold_35_curated_1
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1492
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A9A0J4_DESOH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW67494.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
bjp_ig2069_scaffold_35_curated_2
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1755..2030)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4EPB4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESP62641.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
bjp_ig2069_scaffold_35_curated_3
unknown

Not on your lists

comp(2346..3374)
DNA (1029bp) protein (343aa)
Alpha/beta hydrolase fold containing protein id=4107390 bin=GWF2_Ignavibacteria_35_20 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
alpha/beta hydrolase fold containing protein
bjp_ig2069_scaffold_35_curated_4
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3624..4868
DNA (1245bp) protein (415aa)
Beta-ketoacyl synthase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E488_GEOLS rbh
beta-ketoacyl synthase rbh
Beta-ketoacyl synthase {ECO:0000313|EMBL:ACD95909.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
bjp_ig2069_scaffold_35_curated_5
unknown

Not on your lists

4861..6102
DNA (1242bp) protein (414aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=4127998 bin=GWF2_Nitrospirae_44_13 species=uncultured Nitrospirae bacterium MY3-5B genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
bjp_ig2069_scaffold_35_curated_6
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6324..7841)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4F942_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESP62870.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
bjp_ig2069_scaffold_35_curated_7
Gracilibacillus boraciitolerans, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8051..8932)
DNA (882bp) protein (294aa)
Glycosyltransferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0M1_NITHN
Glycosyltransferase {ECO:0000313|EMBL:GAE95211.1}; TaxID=1298598 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus boraciitolerans JCM 21714.;"
glycosyltransferase
bjp_ig2069_scaffold_35_curated_8
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8963..10444)
DNA (1482bp) protein (494aa)
radical SAM protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B455F4 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACN13737.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
bjp_ig2069_scaffold_35_curated_9
unknown

Not on your lists

comp(10451..10771)
DNA (321bp) protein (107aa)
hypothetical protein id=17052863 bin=RBG_16_Aminicenantes_66_30 species=Desulfospira joergensenii genus=Desulfospira taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
bjp_ig2069_scaffold_35_curated_10
unknown

Not on your lists

comp(10851..11006)
DNA (156bp) protein (52aa)

This feature has no annotations

bjp_ig2069_scaffold_35_curated_11
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11070..12221)
DNA (1152bp) protein (384aa)
glycosyl transferase family protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F163
glycosyl transferase
Glycosyl transferase family 8 {ECO:0000313|EMBL:ACK66221.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 /; RF-1)).;"
bjp_ig2069_scaffold_35_curated_12
unknown

Not on your lists

comp(12218..13249)
DNA (1032bp) protein (344aa)

This feature has no annotations

bjp_ig2069_scaffold_35_curated_13
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13308..14246)
DNA (939bp) protein (313aa)
Putative glycosyltransferase n=1 Tax=planctomycete KSU-1 RepID=I3INA5_9PLAN
Putative glycosyltransferase {ECO:0000313|EMBL:GAB63200.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
glycosyl transferase, group 2 family protein
bjp_ig2069_scaffold_35_curated_14
unknown

Not on your lists

comp(14691..15590)
DNA (900bp) protein (300aa)
Diguanylate cyclase with PAS/PAC sensor id=4956500 bin=GWC2_Syntrophus__56_31 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
diguanylate cyclase
bjp_ig2069_scaffold_35_curated_15
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16064..17323
DNA (1260bp) protein (420aa)
Fe-S oxidoreductase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B1X4_9DELT rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:EIM63487.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter postgatei 2ac9.;"
Fe-S oxidoreductase rbh
bjp_ig2069_scaffold_35_curated_16
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17327..18880
DNA (1554bp) protein (518aa)
histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3] rbh
Histidine ammonia-lyase {ECO:0000313|EMBL:ACD29851.1}; EC=4.3.1.3 {ECO:0000313|EMBL:ACD29851.1};; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
Histidine ammonia-lyase n=2 Tax=Ralstonia pickettii RepID=B2UJV0_RALPJ rbh
bjp_ig2069_scaffold_35_curated_17
unknown

Not on your lists

18877..19293
DNA (417bp) protein (139aa)
Thioesterase family protein (Fragment) id=4934500 bin=GWC2_Syntrophus__56_31 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
bjp_ig2069_scaffold_35_curated_18
unknown

Not on your lists

19277..21016
DNA (1740bp) protein (580aa)
EDD domain protein, DegV family id=4934498 bin=GWC2_Syntrophus__56_31 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
EDD domain-conatining protein rbh
bjp_ig2069_scaffold_35_curated_19
Cyanobium gracile, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21387..21980
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P6Y4_CYAGP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY29167.1}; TaxID=292564 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium gracile (strain ATCC 27147 / PCC 6307).;"
bjp_ig2069_scaffold_35_curated_20
unknown

Not on your lists

21994..22704
DNA (711bp) protein (237aa)
Glycosyl transferase id=4934496 bin=GWC2_Syntrophus__56_31 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
glycosyl transferase
bjp_ig2069_scaffold_35_curated_21
unknown

Not on your lists

23008..26079
DNA (3072bp) protein (1024aa)
Methyltransferase domain protein id=4934494 bin=GWC2_Syntrophus__56_31 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
putative exporter rbh
bjp_ig2069_scaffold_35_curated_22
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26087..27280
DNA (1194bp) protein (398aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Geobacter sp. (strain M21) RepID=C6E3H0_GEOSM rbh
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
bjp_ig2069_scaffold_35_curated_23
unknown

Not on your lists

27383..28264
DNA (882bp) protein (294aa)
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase id=4934492 bin=GWC2_Syntrophus__56_31 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
putative acyltransferase
bjp_ig2069_scaffold_35_curated_24
unknown

Not on your lists

28364..28768
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035DF55D
hypothetical protein
bjp_ig2069_scaffold_35_curated_25
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28793..29827
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ11_CHIPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU64249.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
bjp_ig2069_scaffold_35_curated_26
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29824..30564
DNA (741bp) protein (247aa)
Probable ABC transporter, ATP-binding protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AM59_DESPS
ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein
Probable ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAG36566.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
bjp_ig2069_scaffold_35_curated_27
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30737..31858
DNA (1122bp) protein (374aa)
ABC-2 type transporter, permease component n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FKY9_FLAJ1
ABC-2 type transporter
ABC-2 type transporter, permease component {ECO:0000313|EMBL:ABQ04128.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
bjp_ig2069_scaffold_35_curated_28
unknown

Not on your lists

31849..32160
DNA (312bp) protein (104aa)
Acyl-carrier protein id=4084257 bin=GWF2_Bacteroidetes_33_16 species=Simonsiella muelleri genus=Simonsiella taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
acyl carrier protein; K02078 acyl carrier protein
bjp_ig2069_scaffold_35_curated_29

Not on your lists

32157..33320
DNA (1164bp) protein (388aa)
Beta-ketoacyl synthase {ECO:0000313|EMBL:EQD52836.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EQD52836.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
beta-ketoacyl synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
Beta-ketoacyl synthase n=3 Tax=mine drainage metagenome RepID=T0ZX86_9ZZZZ
bjp_ig2069_scaffold_35_curated_30
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33325..34341
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00038240B4
beta-ketoacyl synthase
Beta-ketoacyl synthase {ECO:0000313|EMBL:ABK98556.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
Displaying items 1-30 of 782 in total

View Taxonomy