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bjp_ig2069_scaffold_390_curated

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2069_scaffold_390_curated_1
unknown

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3..1163
DNA (1161bp) protein (387aa)
hypothetical protein id=7200835 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
bjp_ig2069_scaffold_390_curated_2
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1260..1658
DNA (399bp) protein (133aa)
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUU3_SYNAS
cytoplasmic protein
Hypothetical cytosolic protein {ECO:0000313|EMBL:ABC77849.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
bjp_ig2069_scaffold_390_curated_3
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1651..2304
DNA (654bp) protein (218aa)
protein-L-isoaspartate o-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] rbh
Protein-L-isoaspartate O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000255|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Short=PIMT {ECO:0000255|HAMAP-Rule:MF_00090};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae;
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=PIMT_SYNAS rbh
bjp_ig2069_scaffold_390_curated_4
unknown

Not on your lists

2259..3242
DNA (984bp) protein (328aa)
Lipoprotein id=4393432 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
lipoprotein; K06194 lipoprotein NlpD
bjp_ig2069_scaffold_390_curated_5
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3317..4462
DNA (1146bp) protein (382aa)
coproporphyrinogen oxidase (NAD) (EC:1.-.-.-); K00540 [EC:1.-.-.-] rbh
Coproporphyrinogen oxidase (NAD) {ECO:0000313|EMBL:ABC77846.1}; EC=1.-.-.- {ECO:0000313|EMBL:ABC77846.1};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Coproporphyrinogen oxidase (NAD) n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUT6_SYNAS rbh
bjp_ig2069_scaffold_390_curated_6
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4823..5995
DNA (1173bp) protein (391aa)
3-ketoacyl-CoA thiolase, Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ESP62952.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ESP62952.1};; EC=2.3.1.9 {ECO:0000313|EMBL:ESP62952.1};; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] rbh
3-ketoacyl-CoA thiolase, Acetyl-CoA acetyltransferase n=1 Tax=Smithella sp. ME-1 RepID=V4GU36_9DELT rbh
bjp_ig2069_scaffold_390_curated_7
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(6231..7193)
DNA (963bp) protein (321aa)
Alpha/beta hydrolase family protein n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0F2G6_9LEPT rbh
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:EQA45320.1}; TaxID=1049789 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii serovar Hurstbridge str. 5399.;"
alpha/beta hydrolase fold protein rbh
bjp_ig2069_scaffold_390_curated_8
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7452..7904
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4GSY1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESP62582.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
cytoplasmic protein
bjp_ig2069_scaffold_390_curated_9
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7954..8391
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4GSY1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESP62582.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
cytoplasmic protein
bjp_ig2069_scaffold_390_curated_10
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8831..10672
DNA (1842bp) protein (614aa)
acd2; hypothetical protein (EC:1.3.99.-); K00257 [EC:1.3.99.-]
Acd2 {ECO:0000313|EMBL:ACN13999.1}; EC=1.3.99.- {ECO:0000313|EMBL:ACN13999.1};; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
Acd2 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QKC8_DESAH
bjp_ig2069_scaffold_390_curated_11
unknown

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10783..11283
DNA (501bp) protein (167aa)
Putative uncharacterized protein id=4016709 bin=GWC2_Syntrophobacterales_56_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
bjp_ig2069_scaffold_390_curated_12
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11243..11995)
DNA (753bp) protein (251aa)
Methyltransferase {ECO:0000313|EMBL:ABC77854.1}; EC=2.1.1.- {ECO:0000313|EMBL:ABC77854.1};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Methyltransferase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUU8_SYNAS
bjp_ig2069_scaffold_390_curated_13
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12021..13262)
DNA (1242bp) protein (414aa)
HTH domain of SpoOJ/ParA/ParB/repB family n=1 Tax=Smithella sp. ME-1 RepID=V4FC68_9DELT rbh
HTH domain of SpoOJ/ParA/ParB/repB family {ECO:0000313|EMBL:ESP62858.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
hypothetical protein rbh
bjp_ig2069_scaffold_390_curated_14
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13364..13846
DNA (483bp) protein (161aa)
Esterase-like protein n=1 Tax=Smithella sp. ME-1 RepID=V4GTU8_9DELT
Esterase-like protein {ECO:0000313|EMBL:ESP62857.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
esterase
bjp_ig2069_scaffold_390_curated_15
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13951..14361
DNA (411bp) protein (137aa)
Ferredoxin n=1 Tax=Smithella sp. ME-1 RepID=V4EQ18_9DELT
Ferredoxin {ECO:0000313|EMBL:ESP62856.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
ferridoxin
bjp_ig2069_scaffold_390_curated_16
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14362..14724)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4FC64_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESP62853.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
bjp_ig2069_scaffold_390_curated_17
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14982..15716
DNA (735bp) protein (245aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3]
Ribonuclease 3 n=1 Tax=Smithella sp. ME-1 RepID=V4GTU3_9DELT rbh
bjp_ig2069_scaffold_390_curated_18
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15697..16791
DNA (1095bp) protein (365aa)
BioB/LipA-like protein n=1 Tax=Smithella sp. ME-1 RepID=V4EQ15_9DELT rbh
BioB/LipA-like protein {ECO:0000313|EMBL:ESP62851.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
radical SAM protein
bjp_ig2069_scaffold_390_curated_19
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16856..17746
DNA (891bp) protein (297aa)
GTPase Era n=1 Tax=Smithella sp. ME-1 RepID=V4F8P8_9DELT rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
GTP-binding protein; K03595 GTP-binding protein Era rbh
bjp_ig2069_scaffold_390_curated_20
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17819..19138
DNA (1320bp) protein (440aa)
GTPase Der n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVR7_SYNAS rbh
engA; GTP-binding protein EngA; K03977 GTP-binding protein rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
bjp_ig2069_scaffold_390_curated_21
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19334..21304
DNA (1971bp) protein (657aa)
ABC transporter ATP-binding protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUX6_SYNAS rbh
ABC transporter ATP-binding protein; K06158 ATP-binding cassette, subfamily F, member 3 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ABC77885.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
bjp_ig2069_scaffold_390_curated_22
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21324..21842)
DNA (519bp) protein (173aa)
Putative cytosolic protein n=1 Tax=Smithella sp. ME-1 RepID=V4FHL2_9DELT rbh
Putative cytosolic protein {ECO:0000313|EMBL:ESP62684.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
cytoplasmic protein
bjp_ig2069_scaffold_390_curated_23
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22041..23651)
DNA (1611bp) protein (537aa)
Sodium-dependent phosphate transporter n=1 Tax=Smithella sp. ME-1 RepID=V4FBJ2_9DELT rbh
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:ESP62683.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
sodium-dependent phosphate transporter; K03324 phosphate:Na+ symporter rbh
bjp_ig2069_scaffold_390_curated_24
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23881..24378)
DNA (498bp) protein (166aa)
Rubrerythrin n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUY1_SYNAS
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:ABC77889.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
bjp_ig2069_scaffold_390_curated_25
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24594..25826)
DNA (1233bp) protein (411aa)
Twitching motility protein PilT n=1 Tax=Smithella sp. ME-1 RepID=V4FIC2_9DELT rbh
Twitching motility protein PilT {ECO:0000313|EMBL:ESP62909.1}; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
twitching motility protein rbh
bjp_ig2069_scaffold_390_curated_26
unknown

Not on your lists

comp(26038..26460)
DNA (423bp) protein (141aa)
Uncharacterized protein id=4874733 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
bjp_ig2069_scaffold_390_curated_27

Not on your lists

26747..27652
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XN79_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD22013.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sodium bile acid symporter family; K03453 bile acid:Na+ symporter, BASS family
bjp_ig2069_scaffold_390_curated_28
unknown

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comp(28090..28788)
DNA (699bp) protein (233aa)

This feature has no annotations

bjp_ig2069_scaffold_390_curated_29
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28944..30017)
DNA (1074bp) protein (358aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] rbh
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LSX5_SYNAS rbh
bjp_ig2069_scaffold_390_curated_30
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30049..30969)
DNA (921bp) protein (307aa)
SufBD protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U464_DESML rbh
SufBD protein {ECO:0000313|EMBL:EPR43765.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
ABC transporter permease rbh
Displaying items 1-30 of 51 in total

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