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bjp_ig2103_scaffold_17_curated

Search features with annotation key words

Displaying items 1-30 of 307 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_17_curated_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..727)
DNA (726bp) protein (242aa)
Rhs element Vgr protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J31_DECAR
Rhs element Vgr protein
Rhs element Vgr protein {ECO:0000313|EMBL:AAZ45150.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_17_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

873..4319
DNA (3447bp) protein (1149aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] rbh
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Transcription-repair-coupling factor n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EM0_DECAR rbh
bjp_ig2103_scaffold_17_curated_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4322..5389
DNA (1068bp) protein (356aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=2 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EM1_DECAR rbh
bjp_ig2103_scaffold_17_curated_4
unknown

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5457..5777
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UHH1_9GAMM
hypothetical protein
bjp_ig2103_scaffold_17_curated_5
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5782..6081
DNA (300bp) protein (100aa)
Transcriptional regulator n=1 Tax=mine drainage metagenome RepID=T0Y3F7_9ZZZZ
Putative addiction module antidote protein {ECO:0000313|EMBL:EXI81834.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
addiction module antidote protein
bjp_ig2103_scaffold_17_curated_6
unknown

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6175..6399
DNA (225bp) protein (75aa)

This feature has no annotations

bjp_ig2103_scaffold_17_curated_7
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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7430..7987
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IYE2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHF93947.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
bjp_ig2103_scaffold_17_curated_8
unknown

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comp(8176..8736)
DNA (561bp) protein (187aa)

This feature has no annotations

bjp_ig2103_scaffold_17_curated_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9209..9781
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I6Z3B5_PSEST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFN77492.1}; TaxID=1123519 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri DSM 10701.;"
bjp_ig2103_scaffold_17_curated_10
unknown

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10142..10798
DNA (657bp) protein (219aa)

This feature has no annotations

bjp_ig2103_scaffold_17_curated_11
unknown

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11254..11649
DNA (396bp) protein (132aa)
Putative glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39NE6_BURS3
glyoxalase/bleomycin resistance protein/dioxygenase
bjp_ig2103_scaffold_17_curated_12
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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11807..12124
DNA (318bp) protein (106aa)
UPF0235 protein Mettu_2971 n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J295_9GAMM
UPF0235 protein Mettu_2971 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein; K09131 hypothetical protein
bjp_ig2103_scaffold_17_curated_13
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12134..12973
DNA (840bp) protein (280aa)
phosphoserine phosphatase (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] rbh
Phosphoserine phosphatase {ECO:0000313|EMBL:AAZ46708.1}; EC=3.1.3.3 {ECO:0000313|EMBL:AAZ46708.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Phosphoserine phosphatase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EM3_DECAR rbh
bjp_ig2103_scaffold_17_curated_14
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

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13137..15695
DNA (2559bp) protein (853aa)
CheW-like protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NMU5_9DELT rbh
CheW-like protein {ECO:0000313|EMBL:EAT03022.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
hypothetical protein rbh
bjp_ig2103_scaffold_17_curated_15
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15692..17407)
DNA (1716bp) protein (572aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YE05_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBA31636.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
sulfate transporter rbh
bjp_ig2103_scaffold_17_curated_16
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17493..18500)
DNA (1008bp) protein (336aa)
Peptidase M48, Ste24p n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47E36_DECAR
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:AAZ46895.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_17_curated_17
unknown

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comp(18497..19831)
DNA (1335bp) protein (445aa)
membrane protein n=1 Tax=Methyloversatilis universalis RepID=UPI0003816908 rbh
hypothetical protein
bjp_ig2103_scaffold_17_curated_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19947..20342)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EM8_DECAR
hypothetical protein; K09966 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ46703.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_17_curated_19
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20339..20533)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EM9_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ46702.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_17_curated_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20530..20874)
DNA (345bp) protein (115aa)
Ferredoxin, 2Fe-2S type n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EN0_DECAR
(2Fe-2S) ferredoxin; K04755 ferredoxin, 2Fe-2S
Ferredoxin, 2Fe-2S type {ECO:0000313|EMBL:AAZ46701.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_17_curated_21
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20874..22751)
DNA (1878bp) protein (626aa)
Chaperone protein HscA homolog n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EN1_DECAR rbh
hscA; chaperone protein HscA; K04044 molecular chaperone HscA rbh
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_17_curated_22
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22754..23281)
DNA (528bp) protein (176aa)
Co-chaperone protein HscB homolog n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EN2_DECAR
hscB; co-chaperone HscB; K04082 molecular chaperone HscB
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_17_curated_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23407..23730)
DNA (324bp) protein (108aa)
HesB/YadR/YfhF:Iron-sulfur cluster assembly protein IscA n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EN3_DECAR
HesB/YadR/YfhF:Iron-sulphur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein
HesB/YadR/YfhF:Iron-sulfur cluster assembly protein IscA {ECO:0000313|EMBL:AAZ46698.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_17_curated_24
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23733..24116)
DNA (384bp) protein (128aa)
FeS cluster assembly scaffold IscU n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EN4_DECAR
scaffold protein; K04488 nitrogen fixation protein NifU and related proteins
FeS cluster assembly scaffold IscU {ECO:0000313|EMBL:AAZ46697.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_17_curated_25
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24160..25371)
DNA (1212bp) protein (404aa)
cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7] rbh
Cysteine desulfurase IscS {ECO:0000255|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000255|HAMAP-Rule:MF_00331};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Cysteine desulfurase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=ISCS_DECAR rbh
bjp_ig2103_scaffold_17_curated_26
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25397..26554)
DNA (1158bp) protein (386aa)
aminotransferase class V; K04487 cysteine desulfurase [EC:2.8.1.7] rbh
Aminotransferase, class V n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EN6_DECAR rbh
Aminotransferase, class V {ECO:0000313|EMBL:AAZ46695.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_17_curated_27
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26560..27066)
DNA (507bp) protein (169aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EN7_DECAR
BadM/Rrf2 family transcriptional regulator; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:AAZ46694.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_17_curated_28
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27125..27880)
DNA (756bp) protein (252aa)
Serine O-acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30] rbh
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Serine acetyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EN8_DECAR rbh
bjp_ig2103_scaffold_17_curated_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28016..29785
DNA (1770bp) protein (590aa)
Beta-lactamase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EN9_DECAR rbh
beta-lactamase rbh
Beta-lactamase {ECO:0000313|EMBL:AAZ46692.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
bjp_ig2103_scaffold_17_curated_30
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29789..30058
DNA (270bp) protein (90aa)
Putative acyl-carrier-protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EP0_DECAR
acyl carrier protein; K02078 acyl carrier protein
Putative acyl-carrier-protein {ECO:0000313|EMBL:AAZ46691.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Displaying items 1-30 of 307 in total

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