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bjp_ig2103_scaffold_47_curated

Search features with annotation key words

Displaying items 1-30 of 166 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_47_curated_1
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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248..1030
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HE99_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB02106.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_2
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1091..1474)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I547_METB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS54858.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
bjp_ig2103_scaffold_47_curated_3

Not on your lists

comp(1609..2670)
DNA (1062bp) protein (354aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FH77_9EURY rbh
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
magnesium and cobalt transport protein CorA; K03284 magnesium transporter rbh
bjp_ig2103_scaffold_47_curated_4
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2851..3447)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7I6_METB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS55697.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
bjp_ig2103_scaffold_47_curated_5
unknown

Not on your lists

3495..3701
DNA (207bp) protein (69aa)

This feature has no annotations

bjp_ig2103_scaffold_47_curated_6
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3611..3931)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0P4_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI62266.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
bjp_ig2103_scaffold_47_curated_7
unknown

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4105..4605
DNA (501bp) protein (167aa)

This feature has no annotations

bjp_ig2103_scaffold_47_curated_8
unknown

Not on your lists

5139..5543
DNA (405bp) protein (135aa)

This feature has no annotations

bjp_ig2103_scaffold_47_curated_9
unknown

Not on your lists

6178..6513
DNA (336bp) protein (112aa)

This feature has no annotations

bjp_ig2103_scaffold_47_curated_10
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6510..6773
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQ58_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM05101.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
bjp_ig2103_scaffold_47_curated_11
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7829..9151
DNA (1323bp) protein (441aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I586_METB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS54897.1}; Flags: Precursor;; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
bjp_ig2103_scaffold_47_curated_12
Staphylothermus hellenicus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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9214..11055
DNA (1842bp) protein (614aa)
Serine/threonine protein kinase with WD40 repeats n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7DBS5_STAHD
serine/threonine protein kinase with WD40 repeats
Serine/threonine protein kinase with WD40 repeats {ECO:0000313|EMBL:ADI31622.1}; TaxID=591019 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 /; BK20S6-10-b1 / P8).;"
bjp_ig2103_scaffold_47_curated_13
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11924..13885
DNA (1962bp) protein (654aa)
ATPase (PilT family) n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HE84_METFS rbh
ATPase (PilT family) rbh
ATPase (PilT family) {ECO:0000313|EMBL:AGB02091.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_14
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


13910..16696
DNA (2787bp) protein (929aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
Leucine--tRNA ligase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDJ6_METFS rbh
leucyl-tRNA synthetase rbh
bjp_ig2103_scaffold_47_curated_15
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16758..17048
DNA (291bp) protein (97aa)
Putative nucleotidyltransferase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HH16_METFS
putative nucleotidyltransferase
Putative nucleotidyltransferase {ECO:0000313|EMBL:AGB03300.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_16
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17045..18850
DNA (1806bp) protein (602aa)
WD domain, G-beta repeat-containing protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HG73_METFS rbh
WD domain, G-beta repeat-containing protein rbh
WD domain, G-beta repeat-containing protein {ECO:0000313|EMBL:AGB02089.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_17
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19243..19965)
DNA (723bp) protein (241aa)
Putative membrane protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDS4_METFS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGB02882.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_18
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

Not on your lists

comp(20090..21838)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6U6_KORCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB08175.1}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
bjp_ig2103_scaffold_47_curated_19
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22097..22411)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HBG2_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB02087.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_20
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22446..23246
DNA (801bp) protein (267aa)
TIGR00161 family protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HE77_METFS rbh
TIGR00161 family protein rbh
TIGR00161 family protein {ECO:0000313|EMBL:AGB02086.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_21
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23254..23652
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDJ1_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB02085.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_22
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23667..24980)
DNA (1314bp) protein (438aa)
PEGA domain-containing protein,IPT/TIG domain-containing protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HG68_METFS
PEGA domain-containing protein,IPT/TIG domain-containing protein
PEGA domain-containing protein,IPT/TIG domain-containing protein {ECO:0000313|EMBL:AGB02084.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_23
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25261..25620)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGK0_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB02921.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_24
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25630..26451)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HFW6_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB02920.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_25
unknown

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26604..26900
DNA (297bp) protein (99aa)

This feature has no annotations

bjp_ig2103_scaffold_47_curated_26
unknown

Not on your lists

comp(26927..27094)
DNA (168bp) protein (56aa)

This feature has no annotations

bjp_ig2103_scaffold_47_curated_trna_1
unknown

Not on your lists

26971..27045
DNA (75bp)
transferRNA
bjp_ig2103_scaffold_47_curated_27
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27257..27784)
DNA (528bp) protein (176aa)
NusA family KH domain protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HBF8_METFS
NusA family KH domain protein
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_28
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27799..28089)
DNA (291bp) protein (97aa)
50S ribosomal protein L30e n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HE71_METFS
ribosomal protein L30E
50S ribosomal protein L30e {ECO:0000256|HAMAP-Rule:MF_00481}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
bjp_ig2103_scaffold_47_curated_29
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28123..29298)
DNA (1176bp) protein (392aa)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDI7_METFS rbh
DNA-directed RNA polymerase, subunit A'' rbh
Displaying items 1-30 of 166 in total

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