ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_345

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_345_1
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(1470..2777)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2NHA1_9BACE rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_2
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(3325..3516)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Bacteroidales bacterium CF RepID=U5Q7U8_9BACT
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_3
unknown

Not on your lists

comp(3655..3804)
DNA (150bp) protein (50aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_345_4
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

3887..5137
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Bacteroides fragilis RepID=UPI00037901DF
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_5
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

5286..6464
DNA (1179bp) protein (393aa)
id=2578683 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_6
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

6843..7025
DNA (183bp) protein (61aa)
YcfA-like protein n=1 Tax=Porphyromonas gingivalis JCVI SC001 RepID=T2NA17_PORGN
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_7
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

7049..7450
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Bacteroidales bacterium CF RepID=U5Q3F3_9BACT
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_8
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(7628..8821)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y0Z7_9BACT
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_9
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

9058..10530
DNA (1473bp) protein (491aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system id=2138105 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_10
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(10534..11664)
DNA (1131bp) protein (377aa)
Glycoside hydrolase, family 20, catalytic core id=4280784 bin=GWF2_Bacteroidetes_39_10 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
N-acetyl-beta-hexosaminidase rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_11
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

11868..15131
DNA (3264bp) protein (1088aa)
Glycosyl transferase group 1 id=2041881 bin=GWE2_Bacteroidetes_40_15 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
group 1 glycosyl transferase
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_12
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(15210..17153)
DNA (1944bp) protein (648aa)
Peptidase, M56 family id=2138112 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
TonB family protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_13
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17150..17521)
DNA (372bp) protein (124aa)
Transcriptional regulator, BlaI/MecI/CopY family id=2138115 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
Predicted transcriptional regulator Tax=GWE2_Bacteroidetes_39_28_curated
Predicted transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_345_14
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

17795..18370
DNA (576bp) protein (192aa)
RNA polymerase sigma factor id=4280773 bin=GWF2_Bacteroidetes_39_10 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_15
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

18354..18665
DNA (312bp) protein (104aa)
id=2138121 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_16
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

18674..19180
DNA (507bp) protein (169aa)
id=2138123 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_17
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

19173..21809
DNA (2637bp) protein (879aa)
Putative outer membrane receptor id=2138156 bin=GWE2_Bacteroidetes_39_28 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
TonB-dependent receptor plug
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_18
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

21858..23108
DNA (1251bp) protein (417aa)
Hypothetical lipoprotein id=2138157 bin=GWE2_Bacteroidetes_39_28 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_19
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

23130..24689
DNA (1560bp) protein (520aa)
id=2138158 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_20
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

24705..25682
DNA (978bp) protein (326aa)
Putative uncharacterized protein id=2138159 bin=GWE2_Bacteroidetes_39_28 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_21
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

25690..27009
DNA (1320bp) protein (440aa)
processing peptidase (EC:3.4.24.64)
Processing peptidase id=2138160 bin=GWE2_Bacteroidetes_39_28 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_22
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

27014..28453
DNA (1440bp) protein (480aa)
processing peptidase (EC:3.4.24.64)
Processing peptidase id=2138161 bin=GWE2_Bacteroidetes_39_28 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_23
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(28465..31710)
DNA (3246bp) protein (1082aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALS8_IGNAJ rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_24
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(31707..32534)
DNA (828bp) protein (276aa)
Putative ABC transporter related protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GW04_SELRL
putative ABC transporter related protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_25
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(32547..33638)
DNA (1092bp) protein (364aa)
ABC-type polar amino acid transport system, ATPase component n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZU1_PELTS
GlnQ; ABC-type polar amino acid transport system, ATPase component
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_26
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(33635..34312)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B5DBAC
amino acid ABC transporter permease
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_27
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(34346..34675)
DNA (330bp) protein (110aa)
Stage II sporulation protein id=4656033 bin=GWF2_Bacteroidetes_40_14 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_28
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(34672..35100)
DNA (429bp) protein (143aa)
Anti-sigma regulatory factor id=4656034 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_29
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(35093..37021)
DNA (1929bp) protein (643aa)
Stage II sporulation protein E id=4656035 bin=GWF2_Bacteroidetes_40_14 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
Stage II sporulation protein E; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase)
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_345_30
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(37031..38062)
DNA (1032bp) protein (344aa)
ABC transporter substrate-binding protein id=4656036 bin=GWF2_Bacteroidetes_40_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
Tax=BJP_IG2103_Bacteroidetes_40_10
Displaying items 1-30 of 65 in total

View Taxonomy