ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_839

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_839_1
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

259..1938
DNA (1680bp) protein (560aa)
Peptidase U62 modulator of DNA gyrase id=4089750 bin=GWF2_Bacteroidetes_39_10 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_2
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

1975..3882
DNA (1908bp) protein (636aa)
TldD/PmbA family id=1803504 bin=GWE2_Bacteroidetes_39_28 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_3
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

3898..5667
DNA (1770bp) protein (590aa)
TrkA domain-containing protein id=1803506 bin=GWE2_Bacteroidetes_39_28 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
TrkA-C domain-containing protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_4
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

5672..6892
DNA (1221bp) protein (407aa)
flavoprotein family protein id=1803508 bin=GWE2_Bacteroidetes_39_28 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
flavoprotein family protein; K07007
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_5
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

7067..7492
DNA (426bp) protein (142aa)
Transcriptional regulator, BadM/Rrf2 family id=1803511 bin=GWE2_Bacteroidetes_39_28 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
transcriptional regulator, badm/rrf2 family
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_6
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

7523..8125
DNA (603bp) protein (201aa)
YceI family protein id=1803513 bin=GWE2_Bacteroidetes_39_28 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
ycei family protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_7
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

8169..9449
DNA (1281bp) protein (427aa)
Putative uncharacterized protein id=1803515 bin=GWE2_Bacteroidetes_39_28 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_8
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

9559..10122
DNA (564bp) protein (188aa)
YceI family protein id=4089764 bin=GWF2_Bacteroidetes_39_10 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
ycei family protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_9
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

10190..11149
DNA (960bp) protein (320aa)
Putative SUA5-like translation factor id=1803519 bin=GWE2_Bacteroidetes_39_28 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
Putative SUA5-like translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_10
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

11237..11890
DNA (654bp) protein (218aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase id=1803521 bin=GWE2_Bacteroidetes_39_28 species=Leeuwenhoekiella blandensis genus=Leeuwenhoekiella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_11
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

12021..13169
DNA (1149bp) protein (383aa)
Uncharacterized protein id=1803523 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_12
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

13267..13677
DNA (411bp) protein (137aa)
Putative uncharacterized protein id=1803524 bin=GWE2_Bacteroidetes_39_28 species=Methanosaeta harundinacea genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_13
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(13702..15153)
DNA (1452bp) protein (484aa)
Peptidase M20 id=1803525 bin=GWE2_Bacteroidetes_39_28 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
peptidase m20 rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_14
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(15233..16216)
DNA (984bp) protein (328aa)
Thioredoxin reductase id=4089776 bin=GWF2_Bacteroidetes_39_10 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
thioredoxin reductase
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_15
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(16188..16541)
DNA (354bp) protein (118aa)
Uncharacterized protein id=1803527 bin=GWE2_Bacteroidetes_39_28 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_16
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

16645..17421
DNA (777bp) protein (259aa)
Crp/Fnr family transcriptional regulator id=1803528 bin=GWE2_Bacteroidetes_39_28 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
cAMP-binding protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_17
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

17487..18206
DNA (720bp) protein (240aa)
Uncharacterized protein id=1803529 bin=GWE2_Bacteroidetes_39_28 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_18
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

18311..18940
DNA (630bp) protein (210aa)
Uncharacterized protein id=1803530 bin=GWE2_Bacteroidetes_39_28 species=Bacillus pseudofirmus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
oxidoreductase
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_19
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

19019..19723
DNA (705bp) protein (235aa)
putative biopolymer transport protein ExbB id=4089850 bin=GWF2_Bacteroidetes_39_10 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_20
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

19778..20149
DNA (372bp) protein (124aa)
Biopolymer transport protein ExbD/TolR id=1803577 bin=GWE2_Bacteroidetes_39_28 species=gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_21
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

20164..20931
DNA (768bp) protein (256aa)
Putative uncharacterized protein id=1803579 bin=GWE2_Bacteroidetes_39_28 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_22
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(20951..22231)
DNA (1281bp) protein (427aa)
Putative uncharacterized protein id=1803581 bin=GWE2_Bacteroidetes_39_28 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_23
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

22315..24309
DNA (1995bp) protein (665aa)
Pseudouridine synthase id=4089858 bin=GWF2_Bacteroidetes_39_10 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_24
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

24302..25210
DNA (909bp) protein (303aa)
GTPase Era id=1803585 bin=GWE2_Bacteroidetes_39_28 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_25
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

25233..27926
DNA (2694bp) protein (898aa)
DNA topoisomerase IV subunit A id=1803587 bin=GWE2_Bacteroidetes_39_28 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_26
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

27960..28454
DNA (495bp) protein (165aa)
Shikimate kinase id=4089866 bin=GWF2_Bacteroidetes_39_10 species=Flavobacterium sp. F52 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_27
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(28461..30197)
DNA (1737bp) protein (579aa)
Single-stranded-DNA-specific exonuclease RecJ id=1803591 bin=GWE2_Bacteroidetes_39_28 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_28
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

30265..31830
DNA (1566bp) protein (522aa)
Lysine--tRNA ligase id=4089873 bin=GWF2_Bacteroidetes_39_10 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_29
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

31840..32637
DNA (798bp) protein (266aa)
Putative uncharacterized protein id=1803596 bin=GWE2_Bacteroidetes_39_28 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_839_30
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

32600..33394
DNA (795bp) protein (265aa)
Shikimate 5-dehydrogenase id=1803598 bin=GWE2_Bacteroidetes_39_28 species=Methanoplanus petrolearius genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
Displaying items 1-30 of 37 in total

View Taxonomy