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08E140C01_z5_2013_Ig3399_v2_scaffold_2187

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_1
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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83..646
DNA (564bp) protein (188aa)
Putative uncharacterized protein id=3129783 bin=GWF2_Bacteroidetes_43_63 species=Dokdonia donghaensis genus=Dokdonia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
putative transcriptional regulator; K07735 putative transcriptional regulator
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_2
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(643..1266)
DNA (624bp) protein (208aa)
rhomboid family protein id=2138319 bin=GWE2_Bacteroidetes_42_24 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
rhomboid family protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(1275..2078)
DNA (804bp) protein (268aa)
Uncharacterized protein id=4380705 bin=GWF2_Bacteroidetes_43_63 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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2368..3849
DNA (1482bp) protein (494aa)
Putative uncharacterized protein id=4372114 bin=GWF2_Bacteroidetes_41_31 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_5
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(3959..5092)
DNA (1134bp) protein (378aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=3826113 bin=GWF2_Bacteroidetes_33_16 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
dipeptide/oligopeptide/nickel ABC transporter permease
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_6
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(5305..6075)
DNA (771bp) protein (257aa)
TIGR00266 family protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FPS7_9CLOT rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_7
unknown

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6125..6346
DNA (222bp) protein (74aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2187_trna_1
unknown

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6212..6285
DNA (74bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_8
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6430..7323)
DNA (894bp) protein (298aa)
id=3355468 Tax=RBG_13_Bacteroidetes_42_15_curated
id=3355468 bin=GWF2_Bacteroidetes_41_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_9
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7364..8689)
DNA (1326bp) protein (442aa)
polysulfide reductase Tax=RBG_13_Bacteroidetes_42_15_curated
Polysulfide reductase id=3355323 bin=GWF2_Bacteroidetes_41_9 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes rbh
polysulfide reductase
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_10
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8686..9669)
DNA (984bp) protein (328aa)
Fe-S-cluster-containing hydrogenase subunit Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
Fe-S-cluster-containing hydrogenase subunit id=3839473 bin=GWA2_Bacteroidetes_A19_40_15 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes rbh
Fe-S-cluster-containing hydrogenase subunit rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_11
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9745..10362)
DNA (618bp) protein (206aa)
Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) id=3243854 bin=GWF2_Bacteroidetes_49_14 species=Thiorhodovibrio sp. 970 genus=Thiorhodovibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
thiosulfate reductase cytochrome B subunit (membrane anchoring protein) Tax=GWF2_Bacteroidetes_49_14_curated
thiosulfate reductase cytochrome B subunit (membrane anchoring protein)
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_12
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10362..11345)
DNA (984bp) protein (328aa)
Cytochrome c family protein id=3839927 bin=GWF2_Bacteroidetes_41_31 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit Tax=GWF2_Bacteroidetes_41_31_curated
nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_13
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(11436..11852)
DNA (417bp) protein (139aa)
Cytochrome c, mono-and diheme variants family id=1739208 bin=GWE2_Bacteroidetes_42_24 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
cytochrome c, mono- and diheme variants family
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_14
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12221..13576)
DNA (1356bp) protein (452aa)
Putative uncharacterized protein Tax=GWA2_Bacteroidetes_30_7_curated
Putative uncharacterized protein id=3557006 bin=GWC2_Bacteroidetes_40_22 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_15
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(14157..15185)
DNA (1029bp) protein (343aa)
id=3839919 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=3839919 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_16
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(15295..15711)
DNA (417bp) protein (139aa)
Cytochrome c, mono-and diheme variants family id=4225160 bin=GWF2_Bacteroidetes_43_11 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
cytochrome c, mono- and diheme variants family
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_17
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(15738..16649)
DNA (912bp) protein (304aa)
Putative uncharacterized protein id=4225157 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_18
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(16675..17061)
DNA (387bp) protein (129aa)
id=1739215 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
id=1739215 Tax=GWF2_Bacteroidetes_43_11_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_2187_19
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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17253..17750
DNA (498bp) protein (166aa)
Crp/Fnr family transcriptional regulator id=3541217 bin=GWF2_Bacteroidetes_41_31 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying 20 items

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