ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_2827

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_1
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

1..399
DNA (399bp) protein (133aa)
nuoF; NADH dehydrogenase I subunit F; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3]
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit id=2006768 bin=GWE2_Bacteroidetes_42_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_2
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

425..2149
DNA (1725bp) protein (575aa)
Hydrogenase, Fe-only id=2006767 bin=GWE2_Bacteroidetes_42_24 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
Fe-only hydrogenase, catalytic subunit alpha
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

2169..4184
DNA (2016bp) protein (672aa)
Histidine kinase id=2006766 bin=GWE2_Bacteroidetes_42_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
NtrC family signal transduction histidine kinase rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

4245..4631
DNA (387bp) protein (129aa)
Response regulator receiver protein id=1747276 bin=GWE2_Bacteroidetes_29_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
Response regulator
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_5
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

4635..5765
DNA (1131bp) protein (377aa)
Response regulator receiver sensor signal transduction histidine kinase id=1764807 bin=GWE2_Bacteroidetes_41_25 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
response regulator receiver sensor signal transduction histidine kinase
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_6
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

5776..6399
DNA (624bp) protein (208aa)
Redox-sensing transcriptional repressor rex id=2006763 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
AT-rich DNA-binding protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_7
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

6421..7362
DNA (942bp) protein (314aa)
Riboflavin kinase/FMN adenylyltransferase id=1856787 bin=GWD2_Bacteroidetes_33_33 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152 rbh
riboflavin kinase/FMN adenylyltransferase
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_8
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

7366..8151
DNA (786bp) protein (262aa)
Metal-dependent hydrolase n=1 Tax=Pedobacter sp. BAL39 RepID=A6E6H8_9SPHI rbh
metal-dependent hydrolase; K06167 PhnP protein rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_9
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

8262..9698
DNA (1437bp) protein (479aa)
thiamine biosynthesis protein ThiH id=1745808 bin=GWB2_Bacteroidetes_32_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47 rbh
iron-only hydrogenase maturation rSAM protein HydG
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_10
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

9722..9979
DNA (258bp) protein (86aa)
hypothetical protein MsalJ2_19106 id=4430065 bin=GWF2_Bacteroidetes_29_10 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_11
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

9993..10259
DNA (267bp) protein (89aa)
Uncharacterized protein id=1785939 bin=GWE2_Bacteroidetes_29_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_12
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(10486..11784)
DNA (1299bp) protein (433aa)
hypothetical protein AnHS1_06617 id=1828755 bin=GWE2_Bacteroidetes_42_24 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_13
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(11922..12299)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BU36_9FLAO
hypothetical protein; K06929
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_14
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(12459..13130)
DNA (672bp) protein (224aa)
Inorganic diphosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1]
inorganic pyrophosphatase id=4225247 bin=GWF2_Bacteroidetes_43_11 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2827_15
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

13343..14263
DNA (921bp) protein (307aa)
ATP-dependent chaperone protein ClpB n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VLX5_9SPHI
ATPase AAA
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying 15 items

View Taxonomy