ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_2834

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_1
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(3..188)
DNA (186bp) protein (62aa)
ABC transporter related protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6F7Q6_9PORP
ABC transporter related protein; K01990 ABC-2 type transport system ATP-binding protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_2
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(291..1439)
DNA (1149bp) protein (383aa)
Chaperone protein DnaJ id=3221837 bin=GWF2_Bacteroidetes_43_11 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes rbh
molecular chaperone DnaJ; K03686 molecular chaperone DnaJ Tax=GWF2_Bacteroidetes_43_11_curated
chaperone protein DnaJ rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(1612..2205)
DNA (594bp) protein (198aa)
Protein GrpE id=2770592 bin=GWF2_Bacteroidetes_41_31 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
molecular chaperone GrpE
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(2316..3626)
DNA (1311bp) protein (437aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTC8_SOLCM rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_5
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(3680..4345)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1X0D1_9FLAO
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_6
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5411..5932
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6A7W7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA47020.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_7
unknown

Not on your lists

6410..6844
DNA (435bp) protein (145aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2834_8
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

7159..7428
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1H0_DESAC
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_9
unknown

Not on your lists

comp(7450..7581)
DNA (132bp) protein (44aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2834_10
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

7630..8361
DNA (732bp) protein (244aa)
Uncharacterized protein id=3888354 bin=GWF2_Bacteroidetes_33_16 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_11
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

8368..9285
DNA (918bp) protein (306aa)
LytT family sensor histidine kinase id=4143574 bin=GWF2_Bacteroidetes_41_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
LytT family sensor histidine kinase
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_12
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

9272..10021
DNA (750bp) protein (250aa)
LytT family response regulator id=4298676 bin=GWF2_Bacteroidetes_42_66 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
two component transcriptional regulator, LytTR family
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_13
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


10695..11102
DNA (408bp) protein (136aa)
30S ribosomal protein S12 n=5 Tax=Sphingobacterium RepID=F4C4G2_SPHS2
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_14
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


11223..11603
DNA (381bp) protein (127aa)
30S ribosomal protein S7 id=3867704 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
30S ribosomal protein S7
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_15
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

11649..13751
DNA (2103bp) protein (701aa)
Elongation factor G id=1789825 bin=GWE2_Bacteroidetes_42_24 species=Candidatus Amoebophilus asiaticus genus=Candidatus Amoebophilus taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
elongation factor G; K02355 elongation factor G
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_16
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


13781..14086
DNA (306bp) protein (102aa)
30S ribosomal protein S10 id=4861214 bin=GWA2_Bacteroidetes_40_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_17
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


14162..14791
DNA (630bp) protein (210aa)
50S ribosomal protein L3 id=4573823 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_18
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


14782..15411
DNA (630bp) protein (210aa)
50S ribosomal protein L4 n=9 Tax=Bacteroidales RepID=RL4_PARD8
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_19
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


15459..15749
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Bacteroides sp. CAG:462 RepID=R7CWD7_9BACE
LSU ribosomal protein L23P
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_20
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


15755..16579
DNA (825bp) protein (275aa)
50S ribosomal protein L2 id=4573830 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
LSU ribosomal protein L2P
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_21
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


16603..16881
DNA (279bp) protein (93aa)
SSU ribosomal protein S19P id=3867754 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_22
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


16895..17338
DNA (444bp) protein (148aa)
50S ribosomal protein L22 n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R2K7_OWEHD
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_23
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


17350..18099
DNA (750bp) protein (250aa)
30S ribosomal protein S3 id=3867758 bin=GWF2_Bacteroidetes_43_11 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_24
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


18180..18575
DNA (396bp) protein (132aa)
50S ribosomal protein L16 id=4573838 bin=GWF2_Bacteroidetes_41_31 species=Bacteroides coprosuis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_25
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


18582..18809
DNA (228bp) protein (76aa)
50S ribosomal protein L29 id=4573841 bin=GWF2_Bacteroidetes_41_31 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
LSU ribosomal protein l29p; K02904 large subunit ribosomal protein L29
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_26
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


18821..19078
DNA (258bp) protein (86aa)
30S ribosomal protein S17 id=3867764 bin=GWF2_Bacteroidetes_43_11 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
30S ribosomal protein S17P; K02961 small subunit ribosomal protein S17
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_27
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


19081..19449
DNA (369bp) protein (123aa)
50S ribosomal protein L14 id=1789800 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
50S ribosomal protein L14
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_28
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


19465..19788
DNA (324bp) protein (108aa)
50S ribosomal protein L24 id=1789797 bin=GWE2_Bacteroidetes_42_24 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
50S ribosomal protein L24
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_29
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


19788..20342
DNA (555bp) protein (185aa)
50S ribosomal protein L5 id=1789795 bin=GWE2_Bacteroidetes_42_24 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_2834_30
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


20348..20617
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GQR6_9BACT
rpsN; 30S ribosomal protein S14
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying items 1-30 of 34 in total

View Taxonomy