ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_3997

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3997_1
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

1..366
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Gillisia marina RepID=UPI00029ABAEF
hypothetical protein; K09164 hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_3997_2
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

408..1187
DNA (780bp) protein (260aa)
OmpA family protein id=4366337 bin=GWF2_Bacteroidetes_41_31 species=Bacteroides coprocola genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_3997_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(1191..2096)
DNA (906bp) protein (302aa)
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_3997_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

2235..3668
DNA (1434bp) protein (478aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=1892512 bin=GWE2_Bacteroidetes_42_24 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_3997_5
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


comp(3946..4293)
DNA (348bp) protein (116aa)
50S ribosomal protein L20 n=3 Tax=Capnocytophaga RepID=S2WVZ3_9FLAO
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_3997_6
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


comp(4477..4668)
DNA (192bp) protein (64aa)
50S ribosomal protein L35 id=3842939 bin=GWF2_Bacteroidetes_41_31 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_3997_7
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(4719..5225)
DNA (507bp) protein (169aa)
Translation initiation factor IF-3 id=3842938 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Translation initiation factor IF-3; K02520 translation initiation factor IF-3
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_3997_8
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(5317..7251)
DNA (1935bp) protein (645aa)
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
threonyl-tRNA ligase id=4425352 bin=GWF2_Bacteroidetes_43_11 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_3997_9
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(7457..8290)
DNA (834bp) protein (278aa)
helix-turn-helix domain-containing protein id=3494250 bin=GWF2_Bacteroidetes_41_31 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
helix-turn-helix domain-containing protein
Tax=BJP_IG2103_Bacteroidetes_37_22
08E140C01_z5_2013_Ig3399_v2_scaffold_3997_10
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

8410..9588
DNA (1179bp) protein (393aa)
DNA polymerase IV id=4114425 bin=GWF2_Bacteroidetes_41_9 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes rbh
nucleotidyltransferase/DNA polymerase involved in DNA repair rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_3997_11
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

9799..10386
DNA (588bp) protein (196aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7]
DNA polymerase III subunit alpha, partial n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C8DC
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying 11 items

View Taxonomy