ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_4369

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_4369_1
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

806..2464
DNA (1659bp) protein (553aa)
phosphate ABC transporter substrate-binding protein, phot family; K02040 phosphate transport system substrate-binding protein Tax=GWB2_Bacteroidetes_41_8_curated
Phosphate ABC transporter substrate-binding protein, PhoT family id=2127297 bin=GWE2_Bacteroidetes_41_25 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
phosphate ABC transporter substrate-binding protein, phot family; K02040 phosphate transport system substrate-binding protein
08E140C01_z5_2013_Ig3399_v2_scaffold_4369_2
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2567..3367
DNA (801bp) protein (267aa)
4Fe-4S ferredoxin Tax=GWB2_Bacteroidetes_41_8_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein id=3052802 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
4Fe-4S ferredoxin, iron-sulfur binding protein
08E140C01_z5_2013_Ig3399_v2_scaffold_4369_3
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3360..4586
DNA (1227bp) protein (409aa)
polysulfide reductase NrfD Tax=GWA2_Bacteroidetes_31_9_curated
Protein DVU_0534 id=4211052 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
polysulfide reductase NrfD
08E140C01_z5_2013_Ig3399_v2_scaffold_4369_4
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4635..5354
DNA (720bp) protein (240aa)
Glycine cleavage system H protein id=4126596 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
gcvH; glycine cleavage system protein H; K02437 glycine cleavage system H protein Tax=GWA2_Bacteroidetes_32_17_curated
glycine cleavage H-protein
08E140C01_z5_2013_Ig3399_v2_scaffold_4369_5
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5802..7307
DNA (1506bp) protein (502aa)
NtrC family signal transduction histidine kinase Tax=GWA2_Bacteroidetes_31_9_curated
NtrC family signal transduction histidine kinase id=4302485 bin=GWF2_Bacteroidetes_41_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
NtrC family signal transduction histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_4369_6
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7312..8652
DNA (1341bp) protein (447aa)
Response regulator Tax=GWB2_Bacteroidetes_41_8_curated
Response regulator id=4211055 bin=GWF2_Bacteroidetes_49_14 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) rbh
Response regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_4369_7
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8705..9253
DNA (549bp) protein (183aa)
peptidase, zinc-dependent Tax=GWB2_Bacteroidetes_41_8_curated
Putative Zn-dependent peptidase id=4302488 bin=GWF2_Bacteroidetes_41_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
Putative Zn-dependent peptidase; K06974
Displaying 7 items

View Taxonomy