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08E140C01_z5_2013_Ig3399_v2_scaffold_557

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_557_1
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(305..724)
DNA (420bp) protein (140aa)
PIN domain protein n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CXV3_HALOH
PIN domain-containing protein
PIN domain protein {ECO:0000313|EMBL:ACL70122.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_557_2
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(708..947)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CXV2_HALOH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL70121.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_557_3
Aeromonas veronii, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1419..1958
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Aeromonas veronii AMC34 RepID=K1IU07_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EKB21596.1}; TaxID=1073383 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas veronii AMC34.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_557_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1994..3478)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q2C5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX55444.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_557_5
unknown

Not on your lists

3678..3962
DNA (285bp) protein (95aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_557_6
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4018..4986
DNA (969bp) protein (323aa)
Conserved uncharacterized protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NEB7_DESTT
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:CCK79220.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacula toluolica (strain DSM 7467 / Tol2).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_557_7
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5189..5338
DNA (150bp) protein (50aa)
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LTW0_SYNAS
cytoplasmic protein
Hypothetical cytosolic protein {ECO:0000313|EMBL:ABC77522.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_557_8
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5335..8595
DNA (3261bp) protein (1087aa)
SNF2-related:Helicase, C-terminal:type III restriction enzyme n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T4L0_META2
SNF2-related:Helicase, C-terminal:type III restriction enzyme {ECO:0000313|EMBL:CCE25766.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
SNF2-related:helicase, C-terminal:type III restriction enzyme
08E140C01_z5_2013_Ig3399_v2_scaffold_557_9
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8627..9316
DNA (690bp) protein (230aa)
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LTW2_SYNAS rbh
cytoplasmic protein rbh
Hypothetical cytosolic protein {ECO:0000313|EMBL:ABC77520.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_557_10
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9313..10176
DNA (864bp) protein (288aa)
DNA-damage-inducible protein D n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QK01_DESB2 rbh
DNA-damage-inducible protein D; K14623 DNA-damage-inducible protein D rbh
DNA-damage-inducible protein D; K14623 DNA-damage-inducible protein D Tax=CG_Syntroph_02
08E140C01_z5_2013_Ig3399_v2_scaffold_557_11
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10130..12052
DNA (1923bp) protein (641aa)
type III restriction-modification system methyltransferase; K07316 adenine-specific DNA-methyltransferase [EC:2.1.1.72]
DNA methyltransferase n=1 Tax=Salinivibrio costicola RepID=UPI000395E1B1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJR98256.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_557_12
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12049..12444
DNA (396bp) protein (132aa)
transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
Putative transcriptional regulator n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z590_DESAT
Putative transcriptional regulator {ECO:0000313|EMBL:ADH84747.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_557_13
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12510..15560
DNA (3051bp) protein (1017aa)
type III restriction-modification system restriction subunit (EC:3.1.21.5); K01156 type III restriction enzyme [EC:3.1.21.5] rbh
Type III restriction-modification system restriction subunit {ECO:0000313|EMBL:ABC77518.1}; EC=3.1.21.5 {ECO:0000313|EMBL:ABC77518.1};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Type III restriction-modification system restriction subunit n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LTV5_SYNAS rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_557_14
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15557..19201
DNA (3645bp) protein (1215aa)
helicase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A84317
Helicase {ECO:0000313|EMBL:KIE42244.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
helicase
08E140C01_z5_2013_Ig3399_v2_scaffold_557_15
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19191..22280
DNA (3090bp) protein (1030aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A1B2EF rbh
Uncharacterized protein {ECO:0000313|EMBL:EFK08749.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_557_16
Gemella sanguinis, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22314..23048)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Amphibacillus jilinensis RepID=UPI00030B0170
HAD hydrolase, family IA {ECO:0000313|EMBL:EGF88929.1}; TaxID=562983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella sanguinis M325.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_557_17
Psychroflexus gondwanensis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23064..23417)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000375C406
Abortive infection bacteriophage resistance protein, Abi superfamily {ECO:0000313|EMBL:EMY82470.1}; TaxID=1189619 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus gondwanensis ACAM 44.;"
abortive infection protein; K07052
08E140C01_z5_2013_Ig3399_v2_scaffold_557_18
unknown

Not on your lists

23524..23901
DNA (378bp) protein (126aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_557_19
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23946..25184)
DNA (1239bp) protein (413aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Limnobacter sp. MED105 RepID=A6GQ17_9BURK
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:EDM83922.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_557_20
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25357..28851
DNA (3495bp) protein (1165aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
Transcription-repair-coupling factor n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CLT0_DESK7
08E140C01_z5_2013_Ig3399_v2_scaffold_557_21
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28884..30176)
DNA (1293bp) protein (431aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
trmU; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Geobacter sulfurreducens RepID=MNMA_GEOSL
08E140C01_z5_2013_Ig3399_v2_scaffold_557_22
unknown

Not on your lists

30380..31468
DNA (1089bp) protein (363aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_557_23
unknown

Not on your lists

31455..32657
DNA (1203bp) protein (401aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_557_24
CG_ACD39_01, ACD39, Bacteria

Not on your lists

32888..37099
DNA (4212bp) protein (1404aa)
id=4772762 Tax=CG_ACD39_01
08E140C01_z5_2013_Ig3399_v2_scaffold_557_25
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

37199..38197
DNA (999bp) protein (333aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] Tax=GWB1_Bdellovibrionales_55_8_curated
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] rbh
Adenosine deaminase id=4042213 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_557_26
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

38317..38811
DNA (495bp) protein (165aa)
GNAT family acetyltraansferase n=1 Tax=Clostridium botulinum RepID=UPI00031E52EB
GNAT family acetyltransferase Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_557_27
unknown

Not on your lists

38823..39314
DNA (492bp) protein (164aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_557_28
unknown

Not on your lists

comp(39325..39645)
DNA (321bp) protein (107aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_557_29
unknown

Not on your lists

comp(40001..40996)
DNA (996bp) protein (332aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_557_30
unknown

Not on your lists

41061..42197
DNA (1137bp) protein (379aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

View Taxonomy