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08E140C01_z5_2013_Ig3399_v2_scaffold_1012

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_1
unknown

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comp(1..306)
DNA (306bp) protein (102aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1012_2
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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471..1892
DNA (1422bp) protein (474aa)
mate efflux family protein id=5093361 bin=PER_GWE2_39_6 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria) rbh
Mate efflux family protein {ECO:0000313|EMBL:KKR25771.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
efflux protein, MATE family rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_3
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2094..2846
DNA (753bp) protein (251aa)
Uncharacterized membrane-anchored protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YVH1_AEQSU rbh
membrane-anchored protein rbh
Uncharacterized membrane-anchored protein {ECO:0000313|EMBL:AFL80989.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_4
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2850..3527
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0W0_EMTOG
winged helix family two component transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
two component transcriptional regulator, winged helix family
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_5
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3496..4821
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003481ECA
Histidine kinase {ECO:0000313|EMBL:KFF15808.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
integral membrane sensor signal transduction histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_6
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4821..5558
DNA (738bp) protein (246aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TQF8_MARTH
phosphoesterase pa-phosphatase related protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
phosphoesterase pa-phosphatase related protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_7
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5628..6095
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0Q0_GRAFK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL66195.1}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain KT0803).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_8
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6187..6888
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J6C1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EAZ94820.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_9
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(6897..8885)
DNA (1989bp) protein (663aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK62_RHOMR
TonB-dependent receptor plug; K02014 iron complex outermembrane recepter protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_10
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8954..10804)
DNA (1851bp) protein (617aa)
Chloride channel protein EriC n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YUW5_AEQSU rbh
chloride channel protein EriC rbh
Chloride channel protein EriC {ECO:0000313|EMBL:AFL80783.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_11
unknown

Not on your lists

11274..13619
DNA (2346bp) protein (782aa)
id=7716607 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_12
unknown

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13651..16029
DNA (2379bp) protein (793aa)
id=7716607 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_13
unknown

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16062..18458
DNA (2397bp) protein (799aa)
id=7716607 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_14
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18458..18883
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Bacillus fordii RepID=UPI00037BCB45
Uncharacterized protein {ECO:0000313|EMBL:AIQ59282.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_15
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

18906..20816
DNA (1911bp) protein (637aa)
Iron complex outermembrane recepter protein id=1724027 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Iron complex outermembrane recepter protein; K02014 iron complex outermembrane recepter protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
TonB-dependent receptor
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_16
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

20806..21669
DNA (864bp) protein (288aa)
Cell surface protein id=4174896 bin=GWF2_Ignavibacteria_33_9 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
lipoprotein Tax=GWF2_RIF_IGX_33_9_curated
lipoprotein
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

21641..22759
DNA (1119bp) protein (373aa)
40-residue YVTN family beta-propeller repeat protein id=1724029 bin=GWB2_Ignavibacteria_35_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_18
unknown

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22825..23679
DNA (855bp) protein (285aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1012_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23815..24705
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000368B2B1
Uncharacterized protein {ECO:0000313|EMBL:KIC92892.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_20
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24717..25517
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IXQ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01725.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_21
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25919..26932
DNA (1014bp) protein (338aa)
Uncharacterized protein {ECO:0000313|EMBL:AHW60679.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
hypothetical protein AnHS1_00565 id=4318726 bin=GWF2_Bacteroidetes_42_66 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
protein of unknown function DUF6 transmembrane
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_22
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

27204..29393
DNA (2190bp) protein (730aa)
Putative uncharacterized protein id=4194419 bin=GWF2_Ignavibacteria_33_9 species=Ignicoccus hospitalis genus=Ignicoccus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria rbh
hypothetical protein Tax=GWF2_RIF_IGX_33_9_curated
calcium-binding protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_23
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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29559..30521
DNA (963bp) protein (321aa)
Ankyrin repeat protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2EXV8_TRIVA
ankyrin repeat protein
Ankyrin repeat protein, putative {ECO:0000313|EMBL:EAY02491.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_24

Not on your lists

30577..32892
DNA (2316bp) protein (772aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMY5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN24318.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_25
Chlorobium phaeovibrioides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

33004..33645
DNA (642bp) protein (214aa)
Putative prophage repressor n=1 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=A4SEJ9_PROVI
putative prophage repressor
Putative prophage repressor {ECO:0000313|EMBL:ABP36908.1}; TaxID=290318 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Prosthecochloris vibrioformis (strain DSM 265) (Chlorobium vibrioforme; subsp. thiosulfatophilum (strain DSM 265)) (Chlorobium phaeovibrioides; (strain DSM 265)).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1012_26
Cyanobacterium stanieri, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

33999..34382
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202) RepID=K9YP47_CYASC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ48664.1}; TaxID=292563 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202).;"
Displaying 26 items

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