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08E140C01_z5_2013_Ig3399_v2_scaffold_1186

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_1
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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3..1754
DNA (1752bp) protein (584aa)
Outer membrane protein/peptidoglycan-associated (Lipo)protein id=3793738 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(1814..2251)
DNA (438bp) protein (146aa)
Putative uncharacterized protein id=2013914 bin=GWB2_Ignavibacteria_35_12 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_3
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(2253..2918)
DNA (666bp) protein (222aa)
Phage shock protein A, PspA id=3590558 bin=GWF2_Ignavibacteria_33_9 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
phage shock protein A-like transcriptional regulator; K03969 phage shock protein A Tax=GWF2_RIF_IGX_33_9_curated
phage shock protein A (IM30), suppresses sigma54-dependent transcription; K03969 phage shock protein A
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_4
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3029..3355
DNA (327bp) protein (109aa)
Nucleoid-associated protein C900_04380 n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JMG6_9BACT
Nucleoid-associated protein C900_04380 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein; K09747 hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

3355..3951
DNA (597bp) protein (199aa)
RecR protein n=1 Tax=sediment metagenome RepID=D9PL97_9ZZZZ
Recombination protein recR; K06187 recombination protein RecR
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_6
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3948..4535
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALD7_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH49794.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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4502..5008
DNA (507bp) protein (169aa)
Uncharacterized protein id=2204607 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(4998..6251)
DNA (1254bp) protein (418aa)
Signal transduction histidine kinase id=2017512 bin=GWB2_Ignavibacteria_35_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Signal transduction histidine kinase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Signal transduction histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_9
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


comp(6248..7501)
DNA (1254bp) protein (418aa)
Histidine--tRNA ligase id=2580123 bin=GWF2_Ignavibacteria_33_9 species=Cyanobacterium aponinum genus=Cyanobacterium taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
histidyl-tRNA synthetase
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_10
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(7505..11293)
DNA (3789bp) protein (1263aa)
(myosin heavy-chain) kinase (EC:2.7.11.7)
yiaD; outer membrane protein Tax=GWF2_RIF_IGX_33_9_curated
Possible outer membrane protein id=2580116 bin=GWF2_Ignavibacteria_33_9 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_11
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

11403..12305
DNA (903bp) protein (301aa)
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_12
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(12360..12923)
DNA (564bp) protein (188aa)
Ribosome-recycling factor id=2937716 bin=GWF2_Ignavibacteria_33_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
ribosome recycling factor
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_13
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(12934..13596)
DNA (663bp) protein (221aa)
Uridylate kinase id=2937708 bin=GWF2_Ignavibacteria_33_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
uridylate kinase Tax=GWF2_RIF_IGX_33_9_curated
uridylate kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(13651..14505)
DNA (855bp) protein (285aa)
tsf; translation elongation factor Ts; K02357 elongation factor Ts id=7718695 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
translation elongation factor Ts
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_15
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


comp(14588..15472)
DNA (885bp) protein (295aa)
30S ribosomal protein S2 id=2937698 bin=GWF2_Ignavibacteria_33_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
30S ribosomal protein S2
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_16
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15581..15967)
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=1 Tax=Bacillus coahuilensis RepID=UPI00018508AD
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_17
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


comp(15986..16426)
DNA (441bp) protein (147aa)
50S ribosomal protein L13 id=2937686 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
rplM; putative 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_18
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(16506..18314)
DNA (1809bp) protein (603aa)
DNA mismatch repair protein MutL id=1997689 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
DNA mismatch repair protein MutL
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_19
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(18425..18880)
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=2186414 bin=GWB2_Ignavibacteria_35_12 species=Lactobacillus sanfranciscensis genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Putative uncharacterized protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_20
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(18905..19330)
DNA (426bp) protein (142aa)
Putative gas vesicle protein id=2186412 bin=GWB2_Ignavibacteria_35_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Putative gas vesicle protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Putative gas vesicle protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_21
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(19339..19836)
DNA (498bp) protein (166aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] id=7717938 bin=BACIGN_2 species=Caldicellulosiruptor lactoaceticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_22
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

19904..20746
DNA (843bp) protein (281aa)
prmA; Ribosomal protein L11 methylase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
Ribosomal protein L11 methyltransferase id=3495491 bin=GWF2_Ignavibacteria_33_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_23
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

20713..21648
DNA (936bp) protein (312aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Ppx/GppA phosphatase id=2186406 bin=GWB2_Ignavibacteria_35_12 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_24
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

21679..22425
DNA (747bp) protein (249aa)
hypothetical protein id=2186404 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_25
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(22498..26073)
DNA (3576bp) protein (1192aa)
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
2-oxoglutarate dehydrogenase, E1 subunit id=2186400 bin=GWB2_Ignavibacteria_35_12 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_26
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(26156..26614)
DNA (459bp) protein (153aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN id=4846272 bin=GWA2_Ignavibacteria-rel_35_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
PTS system fructose family transporter subunit IIA
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_27
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

26709..27698
DNA (990bp) protein (330aa)
NAD-dependent epimerase/dehydratase id=2714757 bin=GWF2_Ignavibacteria_33_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria rbh
NAD-dependent epimerase/dehydratase
Tax=GWF2_RIF_IGX_33_9_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1186_28
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

27699..29963
DNA (2265bp) protein (755aa)
Penicillin amidase; K01434 penicillin amidase [EC:3.5.1.11] id=7717901 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
peptidase S45 penicillin amidase
Tax=BJP_IG2069_Ignavibacteriae_38_11
Displaying 28 items

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