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08E140C01_z5_2013_Ig3399_v2_scaffold_1953

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_1
unknown

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comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1953_2
unknown

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comp(226..849)
DNA (624bp) protein (208aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1953_3
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(855..1211)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2B3V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGR73545.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_4
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1214..1993)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2B8F0_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ33029.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_5
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2010..2648)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2B2U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ33028.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_6
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2652..3824)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AUU6_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ33027.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
pan; proteasome-activating nucleotidase Pan rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_7
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3821..4075)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AY49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ33026.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_8
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4499..6502)
DNA (2004bp) protein (668aa)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZNW1_9FIRM rbh
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EDM88557.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
adenine specific DNA methylase Mod rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_9
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6492..9368)
DNA (2877bp) protein (959aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XI11_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EFV19052.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9481..10107)
DNA (627bp) protein (209aa)
Putative resolvase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HE86_9FIRM rbh
Putative resolvase {ECO:0000313|EMBL:CDE36512.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Site-specific recombinases, DNA invertase Pin homologs
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10296..11057)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GEU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99671.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_12
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11063..12838)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Olsenella profusa F0195 RepID=U2V2Y3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:ERL09712.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_13
unknown

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comp(12882..13112)
DNA (231bp) protein (77aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1953_14
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13317..13622)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MQT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS73435.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_15
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13843..14412)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2B2T7_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ33023.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hin; DNA-invertase Hin
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14615..16747)
DNA (2133bp) protein (711aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA helicase II / ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
DNA helicase II / ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAT3_9FIRM rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1953_17
unknown

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comp(16847..17512)
DNA (666bp) protein (222aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1953_18
unknown

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17691..18707
DNA (1017bp) protein (339aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1953_19
unknown

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comp(18901..19638)
DNA (738bp) protein (246aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CBL39680.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBL39680.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
23S rRNA m(5)U-1939 methyltransferase n=2 Tax=Clostridiales RepID=D4MWB4_9FIRM
Displaying 19 items

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