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08E140C01_z5_2013_Ig3399_v2_scaffold_2357

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2357_1
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(2..3661)
DNA (3660bp) protein (1220aa)
PKD domain containing protein id=4128364 bin=GWF2_Bacteroidetes_38_335 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
PKD domain-containing protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_2357_2
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(3801..4802)
DNA (1002bp) protein (334aa)
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase id=2147557 bin=GWB2_Ignavibacteria_35_12 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_2357_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(4799..5608)
DNA (810bp) protein (270aa)
hypothetical protein; K09769 hypothetical protein id=7718497 bin=BACIGN_2 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
metallophosphoesterase
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_2357_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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5674..6225
DNA (552bp) protein (184aa)
ATP/cobalamin adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
ATP/cobalamin adenosyltransferase id=2147561 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
ATP/cobalamin adenosyltransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_2357_5
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6291..7262
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SDU3_PEDSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADY51839.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2357_6
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7454..7897
DNA (444bp) protein (148aa)
N-acetyltransferase GCN5; K03827 putative acetyltransferase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000369EE6D
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ETN94284.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2357_7
unknown

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7960..8196
DNA (237bp) protein (79aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2357_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(8358..9533)
DNA (1176bp) protein (392aa)
HI0933 family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMX6_9BACT
HI0933 family protein {ECO:0000313|EMBL:EEF58772.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein; K07007
08E140C01_z5_2013_Ig3399_v2_scaffold_2357_9
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(9604..10311)
DNA (708bp) protein (236aa)
Uncharacterized protein id=4686838 bin=GWA2_Ignavibacteria-rel_35_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2357_10
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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10482..12710
DNA (2229bp) protein (743aa)
Peptidase M1 membrane alanine aminopeptidase id=3537240 bin=GWF2_Ignavibacteria_33_9 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Peptidase M1 membrane alanine aminopeptidase Tax=GWF2_RIF_IGX_33_9_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_2357_11
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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12707..13468
DNA (762bp) protein (254aa)
id=3537238 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
id=3537238 Tax=GWF2_RIF_IGX_33_9_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_2357_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(13461..14504)
DNA (1044bp) protein (348aa)
ldcA; muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13); K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Muramoyltetrapeptide carboxypeptidase; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
Muramoyltetrapeptide carboxypeptidase id=4686841 bin=GWA2_Ignavibacteria-rel_35_8 species=Gramella forsetii genus=Gramella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
08E140C01_z5_2013_Ig3399_v2_scaffold_2357_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

14588..16339
DNA (1752bp) protein (584aa)
relA; GTP pyrophosphokinase; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
(p)ppGpp synthetase I SpoT/RelA; K00951 GTP pyrophosphokinase [EC:2.7.6.5]
GTP pyrophosphokinase id=4686868 bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria rbh
Displaying 13 items

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