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08E140C01_z5_2013_Ig3399_v2_scaffold_3171

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3171_1
GWA1_OP11_43_11, Gottesmanbacteria, Microgenomates, Bacteria

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3..500
DNA (498bp) protein (166aa)
hypothetical protein Tax=GWA1_OP11_43_11
08E140C01_z5_2013_Ig3399_v2_scaffold_3171_2
unknown

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comp(855..2504)
DNA (1650bp) protein (550aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3171_3
unknown

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2734..3216
DNA (483bp) protein (161aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3171_4
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3233..4468)
DNA (1236bp) protein (412aa)
sufS; Cysteine desulfurase, SufS (EC:2.8.1.7); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
Cysteine desulfurase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XND6_FLAIG
08E140C01_z5_2013_Ig3399_v2_scaffold_3171_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(4469..5782)
DNA (1314bp) protein (438aa)
FeS assembly protein SufD id=2081051 bin=GWB2_Ignavibacteria_35_12 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
FeS assembly protein SufD Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
FeS assembly protein SufD rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3171_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(5792..6562)
DNA (771bp) protein (257aa)
transporter n=1 Tax=Gillisia marina RepID=UPI00029A12B9
sufC; Fe-S cluster assembly ATP-binding protein SufC; K09013 Fe-S cluster assembly ATP-binding protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3171_7
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(6603..8054)
DNA (1452bp) protein (484aa)
sufB; cysteine desulfurase activator complex subunit SufB; K09014 Fe-S cluster assembly protein SufB id=7716843 bin=BACIGN_2 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
sufB; cysteine desulfurase activator complex subunit SufB; K09014 Fe-S cluster assembly protein SufB
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_3171_8
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(8056..8493)
DNA (438bp) protein (146aa)
Transcriptional regulator, BadM/Rrf2 family id=2081058 bin=GWB2_Ignavibacteria_35_12 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_3171_9
unknown

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8711..9118
DNA (408bp) protein (136aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3171_10
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9718..11949)
DNA (2232bp) protein (744aa)
TonB-dependent receptor n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXR4_9SPHI rbh
TonB-dependent receptor {ECO:0000313|EMBL:EEI92276.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
TonB-dependent receptor rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3171_11
unknown

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comp(12092..12523)
DNA (432bp) protein (144aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_3171_12
unknown

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comp(12673..12879)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 12 items

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