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08E140C01_z5_2013_Ig3399_v2_scaffold_426

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_426_1
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

2..325
DNA (324bp) protein (108aa)
Peptidase S45 penicillin amidase id=4846269 bin=GWA2_Ignavibacteria-rel_35_8 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_426_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(326..1015)
DNA (690bp) protein (230aa)
Uncharacterized protein involved in an early stage of isoprenoid biosynthesis n=1 Tax=Beggiatoa alba B18LD RepID=I3CCW1_9GAMM
Uncharacterized protein involved in an early stage of isoprenoid biosynthesis {ECO:0000313|EMBL:EIJ41454.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_426_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(1207..3441)
DNA (2235bp) protein (745aa)
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Polyribonucleotide nucleotidyltransferase id=1718067 bin=GWA2_Ignavibacteria-rel_35_8 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
polynucleotide phosphorylase/polyadenylase
08E140C01_z5_2013_Ig3399_v2_scaffold_426_4
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


comp(3612..3878)
DNA (267bp) protein (89aa)
rpsO; Ribosomal protein S15; K02956 small subunit ribosomal protein S15
30S ribosomal protein S15 id=3211488 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
rpsO; Ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_426_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(3949..4890)
DNA (942bp) protein (314aa)
ribF; Riboflavin kinase; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Riboflavin kinase id=1718065 bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria rbh
riboflavin kinase/FMN adenylyltransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_426_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4877..5605)
DNA (729bp) protein (243aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B id=4348791 bin=GWF2_Bacteroidetes_29_10 species=Myroides injenensis genus=Myroides taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
08E140C01_z5_2013_Ig3399_v2_scaffold_426_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(5607..5948)
DNA (342bp) protein (114aa)
Ribosome-binding factor A id=1732407 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
rbfA; ribosome-binding factor A Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
rbfA; ribosome-binding factor A
08E140C01_z5_2013_Ig3399_v2_scaffold_426_8
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5950..8634)
DNA (2685bp) protein (895aa)
infB; Translation initiation factor 2; K02519 translation initiation factor IF-2 Tax=GWA2_Ignavibacteria_54_16_curated
ial:IALB_0639 infB; Translation initiation factor 2; K02519 translation initiation factor IF-2 id=718319 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
bacterial translation initiation factor 2 (bif-2)
08E140C01_z5_2013_Ig3399_v2_scaffold_426_9
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(8684..10210)
DNA (1527bp) protein (509aa)
Transcription elongation factor NusA id=1732405 bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
transcription elongation factor NusA Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Transcription elongation factor; K02600 N utilization substance protein A
08E140C01_z5_2013_Ig3399_v2_scaffold_426_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

10376..11539
DNA (1164bp) protein (388aa)
gcdH; glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] id=7718167 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
gcdH; glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
gcdH; glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
08E140C01_z5_2013_Ig3399_v2_scaffold_426_11
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

11536..12444
DNA (909bp) protein (303aa)
Putative uncharacterized protein id=3496678 bin=GWF2_Ignavibacteria_33_9 species=Polysphondylium pallidum genus=Polysphondylium taxon_order=Dictyosteliida taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Hsp33 protein; K04083 molecular chaperone Hsp33
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_426_12
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12508..14103)
DNA (1596bp) protein (532aa)
Peptidoglycan-associated outer membrane protein
Peptidoglycan-associated outer membrane protein id=3663193 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Peptidoglycan-associated outer membrane protein Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_426_13
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(14139..15413)
DNA (1275bp) protein (425aa)
purA; Adenylosuccinate synthase; K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase id=4680898 bin=GWA2_Ignavibacteria-rel_35_8 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria rbh
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_426_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(15494..15823)
DNA (330bp) protein (110aa)
Anti-sigma factor antagonist n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWZ2_9BACT
anti-anti-sigma regulatory factor
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_426_15
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(15826..16761)
DNA (936bp) protein (312aa)
Protein translocase subunit SecF id=3537486 bin=GWF2_Ignavibacteria_33_9 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria rbh
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=GWF2_RIF_IGX_33_9_curated
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF
08E140C01_z5_2013_Ig3399_v2_scaffold_426_16
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(16782..18917)
DNA (2136bp) protein (712aa)
Protein translocase subunit SecD id=3537484 bin=GWF2_Ignavibacteria_33_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD Tax=GWF2_RIF_IGX_33_9_curated
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD
08E140C01_z5_2013_Ig3399_v2_scaffold_426_17
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(19061..20572)
DNA (1512bp) protein (504aa)
Aminobenzoyl-glutamate transport protein n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5EF92_9FIRM
AbgT transporter; K12942 aminobenzoyl-glutamate transport protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_426_18
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20602..21513
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CXG7_THEYO
Uncharacterized protein {ECO:0000313|EMBL:ERM92717.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
putative glycosyltransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_426_19
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

21503..22336
DNA (834bp) protein (278aa)
Glycosyl transferase family 2 id=4593939 bin=GWA2_Ignavibacteria-rel_35_8 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
family 2 glycosyl transferase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
family 2 glycosyl transferase
08E140C01_z5_2013_Ig3399_v2_scaffold_426_20
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

22323..23813
DNA (1491bp) protein (497aa)
Amidohydrolase 3 id=2238316 bin=GWB2_Ignavibacteria_35_12 species=Shewanella sediminis genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
amidohydrolase 3; K07047 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
metal-dependent amidohydrolase with the TIM-barrel fold; K07047
08E140C01_z5_2013_Ig3399_v2_scaffold_426_21
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


23943..26141
DNA (2199bp) protein (733aa)
30S ribosomal protein S1 id=1798003 bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
30S ribosomal protein S1
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_426_22
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(26556..27314)
DNA (759bp) protein (253aa)
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
tRNA pseudouridine synthase A id=1714608 bin=GWB2_Ignavibacteria_35_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
tRNA-pseudouridine synthase TrmA
08E140C01_z5_2013_Ig3399_v2_scaffold_426_23
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(27311..27940)
DNA (630bp) protein (210aa)
N-glycosylase/DNA lyase; K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Endonuclease III id=2399068 bin=GWA2_Ignavibacteria-rel_35_8 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_426_24
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

27997..29175
DNA (1179bp) protein (393aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] rbh
Peptidase M24 id=2205817 bin=GWA2_Ignavibacteria-rel_35_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria rbh
peptidase M24 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_426_25
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(29256..30677)
DNA (1422bp) protein (474aa)
Cytochrome c class I id=2900214 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
cytochrome c class I Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
cytochrome c class I
08E140C01_z5_2013_Ig3399_v2_scaffold_426_26
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(30692..31576)
DNA (885bp) protein (295aa)
cyoE; Protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Protoheme IX farnesyltransferase id=2155899 bin=GWB2_Ignavibacteria_35_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
protoheme IX farnesyltransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_426_27
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(31609..32298)
DNA (690bp) protein (230aa)
Cytochrome c oxidase subunit 2 n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZMP0_MELRP
cytochrome c oxidase subunit II
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_426_28
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(32302..32619)
DNA (318bp) protein (106aa)
Cytochrome c oxidase subunit IV n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z2A5_MELRP
cytochrome c oxidase subunit IV
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_426_29
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(32631..33311)
DNA (681bp) protein (227aa)
coxC; Cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase subunit III id=3704864 bin=GWF2_Ignavibacteria_33_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_426_30
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(33313..34989)
DNA (1677bp) protein (559aa)
Cytochrome c oxidase subunit I id=4575501 bin=GWA2_Ignavibacteria-rel_35_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
cytochrome c oxidase subunit I Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
cytochrome c oxidase subunit I
Displaying items 1-30 of 58 in total

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