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08E140C01_z5_2013_Ig3399_v2_scaffold_439

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_439_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


3..1664
DNA (1662bp) protein (554aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Alanine--tRNA ligase id=4791477 bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
alanyl-tRNA synthetase
08E140C01_z5_2013_Ig3399_v2_scaffold_439_2
unknown

Not on your lists

1687..2211
DNA (525bp) protein (175aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_439_3
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2291..2701)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000382CF77
rnp-1 like RNA-binding protein
RRM domain-containing RNA-binding protein {ECO:0000313|EMBL:EJF54205.1}; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_439_4
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(2732..3634)
DNA (903bp) protein (301aa)
Drug/metabolite transporter DMT superfamily id=2230117 bin=GWB2_Ignavibacteria_35_12 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
permeases of the drug/metabolite transporter (DMT) superfamily
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_439_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(3635..4825)
DNA (1191bp) protein (397aa)
ErfK/YbiS/YcfS/YnhG family protein id=2230115 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
YkuD domain protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_439_6
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4915..5889
DNA (975bp) protein (325aa)
deoxyhypusine synthase; K00809 deoxyhypusine synthase [EC:2.5.1.46]
deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=GWE2_Bacteroidetes_32_14_curated
Homospermidine synthase (Spermidine-specific) id=3883921 bin=GWF2_Bacteroidetes_33_16 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
08E140C01_z5_2013_Ig3399_v2_scaffold_439_7
unknown

Not on your lists

5962..6834
DNA (873bp) protein (291aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_439_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

6850..8322
DNA (1473bp) protein (491aa)
OmpA/MotB domain protein id=2195488 bin=GWB2_Ignavibacteria_35_12 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
OmpA/MotB domain-containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
outer membrane protein/peptidoglycan-associated (lipo)protein
08E140C01_z5_2013_Ig3399_v2_scaffold_439_9
Geomicrobium sp. JCM 19039, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8425..9399)
DNA (975bp) protein (325aa)
ABC transporter ATP-binding protein; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30]
ABC transporter, ATP-binding protein n=1 Tax=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) RepID=B9KE40_CAMLR
Ferric iron ABC transporter, ATP-binding protein {ECO:0000313|EMBL:GAK12086.1}; TaxID=1460636 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19039.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_439_10
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9396..10925)
DNA (1530bp) protein (510aa)
Ferric iron ABC transporter, permease protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DQ66_9BACT
ABC transporter permease {ECO:0000313|EMBL:KEO73181.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
Fe3+ ABC transporter permease
08E140C01_z5_2013_Ig3399_v2_scaffold_439_11
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

11229..11780
DNA (552bp) protein (184aa)
Uncharacterized protein id=2180515 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_439_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

11815..13536
DNA (1722bp) protein (574aa)
RNA polymerase, sigma 54 subunit, RpoN id=2180516 bin=GWB2_Ignavibacteria_35_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor
08E140C01_z5_2013_Ig3399_v2_scaffold_439_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

13533..14645
DNA (1113bp) protein (371aa)
Dihydroorotate oxidase id=1940205 bin=GWB2_Ignavibacteria_35_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Dihydroorotate oxidase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_439_14
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14665..15345)
DNA (681bp) protein (227aa)
BH0832 protein id=3888223 bin=GWF2_Bacteroidetes_33_16 species=Salimicrobium sp. MJ3 genus=Salimicrobium taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_32_14_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_439_15
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15396..16190)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AKT0_FLELS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM04565.1}; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_439_16
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16330..17859
DNA (1530bp) protein (510aa)
Carbon-nitrogen hydrolase n=1 Tax=Formosa sp. AK20 RepID=M7MKI9_9FLAO rbh
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:EMQ95400.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_439_17
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17921..19825
DNA (1905bp) protein (635aa)
PKD domain containing protein id=3428706 bin=GWF2_Bacteroidetes_38_335 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
PKD domain-containing protein Tax=GWF2_Bacteroidetes_38_335_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_439_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19849..20193
DNA (345bp) protein (115aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=H5BWE4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:CEK06997.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
protein of unknown function DUF805
08E140C01_z5_2013_Ig3399_v2_scaffold_439_19
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(20200..21228)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT20_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EHO41449.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
Biotin-protein ligase-like protein
08E140C01_z5_2013_Ig3399_v2_scaffold_439_20
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21321..21884
DNA (564bp) protein (188aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosidase I n=1 Tax=Kordia algicida OT-1 RepID=A9DL13_9FLAO
tag; DNA-3-methyladenine glycosidase I Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_439_21
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(21894..22325)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A4443
hypothetical protein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_439_22
unknown

Not on your lists

comp(22322..22591)
DNA (270bp) protein (90aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_439_23
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22608..24119)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JN82_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR68994.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_439_24
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24134..24628)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI00037DA036
Acetyltransferase {ECO:0000313|EMBL:AJH16353.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
GCN5-related N-acetyltransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_439_25
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24631..25395)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L322_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE50681.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_439_26
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

25417..26958
DNA (1542bp) protein (514aa)
GMP synthase large subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=GWF2_RIF_IGX_33_9_curated
GMP synthase [glutamine-hydrolyzing] id=4174957 bin=GWF2_Ignavibacteria_33_9 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria rbh
GMP synthase glutamine-hydrolyzing
08E140C01_z5_2013_Ig3399_v2_scaffold_439_27
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27005..27229
DNA (225bp) protein (75aa)
Putative uncharacterized protein id=2232868 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein Tax=GWA2_Bacteroidetes_32_17_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_439_28
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

27229..27378
DNA (150bp) protein (50aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034BF617
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
putative plasmid maintenance toxin/cell growth inhibitor
08E140C01_z5_2013_Ig3399_v2_scaffold_439_29
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27380..27553
DNA (174bp) protein (58aa)
hypothetical protein Tax=GWF2_Bacteroidetes_35_48_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_439_30
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

27574..28035
DNA (462bp) protein (154aa)
TonB family protein id=1903710 bin=GWB2_Ignavibacteria_35_12 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
TonB family protein; K03832 periplasmic protein TonB Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Displaying items 1-30 of 59 in total

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