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08E140C01_z5_2013_Ig3399_v2_scaffold_802

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_802_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(2..1192)
DNA (1191bp) protein (397aa)
Adenosylhomocysteinase id=1763523 bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
S-adenosylhomocysteine hydrolase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
S-adenosylhomocysteine hydrolase
08E140C01_z5_2013_Ig3399_v2_scaffold_802_2
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

1447..6102
DNA (4656bp) protein (1552aa)
Putative protease id=7718706 bin=BACIGN_2 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=GWF2_RIF_IGX_33_9_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_802_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


6439..8985
DNA (2547bp) protein (849aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase id=2223253 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
08E140C01_z5_2013_Ig3399_v2_scaffold_802_4
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

9113..10192
DNA (1080bp) protein (360aa)
Probable dual-specificity RNA methyltransferase RlmN id=3262099 bin=GWF2_Ignavibacteria_33_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Ribosomal RNA large subunit methyltransferase N Tax=GWF2_RIF_IGX_33_9_curated
Ribosomal RNA large subunit methyltransferase N
08E140C01_z5_2013_Ig3399_v2_scaffold_802_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

10189..11082
DNA (894bp) protein (298aa)
hypothetical protein id=2669902 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria rbh
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_802_6
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11127..11414
DNA (288bp) protein (96aa)
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=719978 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
08E140C01_z5_2013_Ig3399_v2_scaffold_802_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

11411..12172
DNA (762bp) protein (254aa)
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
3-deoxy-manno-octulosonate cytidylyltransferase id=2669900 bin=GWA2_Ignavibacteria-rel_35_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
08E140C01_z5_2013_Ig3399_v2_scaffold_802_8
unknown

Not on your lists

comp(12169..12864)
DNA (696bp) protein (232aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_802_9
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(12907..13710)
DNA (804bp) protein (268aa)
Peptidylprolyl isomerase (EC:5.2.1.8); K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] Tax=RBG_13_OP8X_37_8_curated
FKBP-type peptidylprolyl isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] id=7718274 bin=BACIGN_2 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
FKBP-type peptidylprolyl isomerase
08E140C01_z5_2013_Ig3399_v2_scaffold_802_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(13750..14709)
DNA (960bp) protein (320aa)
Putative uncharacterized protein id=2223239 bin=GWB2_Ignavibacteria_35_12 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
Putative uncharacterized protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_802_11
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14901..17009
DNA (2109bp) protein (703aa)
Probable outer membrane protein, OmpA family n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XPQ9_FLAIG rbh
outer membrane protein precursor, OmpA family rbh
Probable outer membrane protein, OmpA family {ECO:0000313|EMBL:CCG54125.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_802_12
unknown

Not on your lists

comp(16999..17430)
DNA (432bp) protein (144aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_802_13
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(17432..18352)
DNA (921bp) protein (307aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Putative uncharacterized protein id=2160012 bin=GWE2_Bacteroidetes_42_24 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_802_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

18498..19682
DNA (1185bp) protein (395aa)
s-adenosylmethionine/tRNA-ribosyltransferase isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase id=2199162 bin=GWB2_Ignavibacteria_35_12 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_802_15
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(19683..20954)
DNA (1272bp) protein (424aa)
processing peptidase (EC:3.4.24.64) Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Processing peptidase id=4953945 bin=GWA2_Ignavibacteria-rel_35_8 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria rbh
peptidase M16 domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_802_16
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(21040..22050)
DNA (1011bp) protein (337aa)
Aminodeoxychorismate lyase id=3995930 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
aminodeoxychorismate lyase
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_802_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(22047..23369)
DNA (1323bp) protein (441aa)
recombination factor protein RarA; K07478 putative ATPase id=7717287 bin=BACIGN_2 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
recombination factor protein RarA; K07478 putative ATPase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
recombination factor protein RarA; K07478 putative ATPase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_802_18
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

23599..24018
DNA (420bp) protein (140aa)
Uncharacterized protein id=4440478 bin=GWF2_Ignavibacteria_33_9 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Uncharacterized protein Tax=GWF2_RIF_IGX_33_9_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_802_19
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

24073..25647
DNA (1575bp) protein (525aa)
Uncharacterized protein id=3233235 bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_802_20
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

25644..26252
DNA (609bp) protein (203aa)
ABC-type multidrug transport system ATPase component id=3590574 bin=GWF2_Ignavibacteria_33_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
ABC transporter related protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_802_21
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

26255..27130
DNA (876bp) protein (292aa)
Soluble lytic murein transglycosylase-like protein id=1987039 bin=GWB2_Ignavibacteria_35_12 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
lytic murein transglycosylase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
peptidoglycan-binding LysM
08E140C01_z5_2013_Ig3399_v2_scaffold_802_22
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

27223..27894
DNA (672bp) protein (224aa)
Oxidoreductase, short chain dehydrogenase id=4667241 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
oxidoreductase, short chain dehydrogenase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
short-chain alcohol dehydrogenase
08E140C01_z5_2013_Ig3399_v2_scaffold_802_23
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

27884..28690
DNA (807bp) protein (269aa)
murI; glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
Glutamate racemase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YFY7_THEYD
08E140C01_z5_2013_Ig3399_v2_scaffold_802_24
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28832..30208
DNA (1377bp) protein (459aa)
tnaA; tryptophanase; K01667 tryptophanase [EC:4.1.99.1]
Tryptophanase id=4262148 bin=GWF2_Bacteroidetes_29_10 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
Tax=BJP_IG2102_Flavobacteriales_34_12
08E140C01_z5_2013_Ig3399_v2_scaffold_802_25
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30532..31131
DNA (600bp) protein (200aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
manganese/iron superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1H0Z5_9FLAO rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_802_26
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(31191..33176)
DNA (1986bp) protein (662aa)
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UL04_TANFA rbh
peptidase, S9A/B/C family, catalytic domain-containing protein rbh
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_802_27
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

33350..33748
DNA (399bp) protein (133aa)
Putative uncharacterized protein id=3841763 bin=GWF2_Ignavibacteria_33_9 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
hypothetical protein Tax=GWF2_RIF_IGX_33_9_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_802_28
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33906..35021
DNA (1116bp) protein (372aa)
linoleoyl-CoA desaturase (EC:1.14.19.3); K00508 linoleoyl-CoA desaturase [EC:1.14.19.3] rbh
Linoleoyl-CoA desaturase {ECO:0000313|EMBL:ADR21364.1}; EC=1.14.19.3 {ECO:0000313|EMBL:ADR21364.1};; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000369C3CF rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_802_29
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35353..35550
DNA (198bp) protein (66aa)
epimerase n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255AE13
Uncharacterized protein {ECO:0000313|EMBL:GAL65090.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_802_30
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35794..36231)
DNA (438bp) protein (146aa)
Heavy metal translocating P-type ATPase n=1 Tax=Bacillus cereus HuA3-9 RepID=R8CX79_BACCE
ATPase {ECO:0000313|EMBL:KJF27500.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
Displaying items 1-30 of 49 in total

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