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08E140C01_z5_2013_Ig3399_v2_scaffold_4423

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_4423_1
unknown

Not on your lists

720..2036
DNA (1317bp) protein (439aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_4423_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


comp(2092..2349)
DNA (258bp) protein (86aa)
30S ribosomal protein S18 id=2012366 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
30S ribosomal protein S18 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
08E140C01_z5_2013_Ig3399_v2_scaffold_4423_3
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists


comp(2349..2582)
DNA (234bp) protein (78aa)
50S ribosomal protein L31 id=4197860 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=Gluconacetobacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
rpmE2; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=GWF2_RIF_IGX_33_9_curated
rpmE; 50S ribosomal protein L31
08E140C01_z5_2013_Ig3399_v2_scaffold_4423_4
unknown

Not on your lists

comp(2590..2757)
DNA (168bp) protein (56aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_4423_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(2850..3707)
DNA (858bp) protein (286aa)
Beta-lactamase domain-containing protein id=1714702 bin=GWB2_Ignavibacteria_35_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
beta-lactamase domain-containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
beta-lactamase domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_4423_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

3862..6033
DNA (2172bp) protein (724aa)
ppiD; Parvulin-like peptidyl-prolyl isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
ppiD; Parvulin-like peptidyl-prolyl isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
Parvulin-like peptidyl-prolyl isomerase id=1714704 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_4423_7
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

6078..6980
DNA (903bp) protein (301aa)
Squalene/phytoene synthase id=4534606 bin=GWA2_Ignavibacteria-rel_35_8 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
squalene synthase HpnC
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_4423_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

6977..7888
DNA (912bp) protein (304aa)
crtB; phytoene synthase; K02291 phytoene synthase [EC:2.5.1.32] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Phytoene synthase id=4534607 bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Squalene/phytoene synthase
08E140C01_z5_2013_Ig3399_v2_scaffold_4423_9
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

7942..8424
DNA (483bp) protein (161aa)
NADH dehydrogenase subunit E id=4534609 bin=GWA2_Ignavibacteria-rel_35_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
NADH dehydrogenase subunit E
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_4423_10
unknown

Not on your lists

8421..9290
DNA (870bp) protein (290aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_4423_11
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9274..9405
DNA (132bp) protein (44aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGO92442.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
Displaying 11 items

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