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08E140C01_z5_2013_Ig3399_v2_scaffold_1085

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_1
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..719
DNA (717bp) protein (239aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Thermincola potens (strain JR) RepID=D5XF32_THEPJ
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_2
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

740..1621
DNA (882bp) protein (294aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
dapA; dihydrodipicolinate synthase DapA (EC:4.2.1.52) rbh
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LEW3_THEPS rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_3
unknown

Not on your lists

1640..1867
DNA (228bp) protein (76aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1085_4
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1843..3510
DNA (1668bp) protein (556aa)
RNA-metabolising metallo-beta-lactamase; K12574 ribonuclease J [EC:3.1.-.-] rbh
RNA-metabolising metallo-beta-lactamase n=1 Tax=Thermincola potens (strain JR) RepID=D5XF38_THEPJ rbh
Ribonuclease J {ECO:0000313|EMBL:KJS23430.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_5
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

3664..4386
DNA (723bp) protein (241aa)
Translocation-enhancing protein TepA n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LEB0_THEPS rbh
tepA; translocation-enhancing protein TepA rbh
Protein export-enhancing factor {ECO:0000313|EMBL:CEO87319.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_6
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

4406..4633
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:ABC19384.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_7
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4757..6994
DNA (2238bp) protein (746aa)
DNA segregation ATPase FtsK/SpoIIIE and related proteins n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D2R0_PELTS rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS23428.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_8
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

7069..7833
DNA (765bp) protein (255aa)
Transcriptional regulator, putative n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9P3_AMMDK
Transcriptional regulator XRE family Tax=S_Thermoanaerobacterales_50_218
transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_9
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7890..9236
DNA (1347bp) protein (449aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1505 species="Bacteria; Firmi
MiaB-like tRNA modifying protein YliG; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-]
Ribosomal protein S12 methylthiotransferase RimO n=2 Tax=Clostridium sordellii RepID=T0CKX7_CLOSO rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_10
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9277..9771
DNA (495bp) protein (165aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KLB4_9FIRM
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KJS23522.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_11
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9764..10183
DNA (420bp) protein (140aa)
Putative phosphatidylglycerophosphatase A n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GAL6_DESGI
Uncharacterized protein {ECO:0000313|EMBL:KJS23425.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
putative phosphatidylglycerophosphatase A
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_12
unknown

Not on your lists

10382..10897
DNA (516bp) protein (172aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1085_13
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10894..12402
DNA (1509bp) protein (503aa)
Vesicle-fusing ATPase (EC:3.6.4.6) rbh
Vesicle-fusing ATPase n=1 Tax=Thermincola potens (strain JR) RepID=D5XF72_THEPJ rbh
ATPase {ECO:0000313|EMBL:KJS23423.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_14
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12528..12923
DNA (396bp) protein (132aa)
Putative competence-damage inducible protein n=1 Tax=Brevibacillus sp. BC25 RepID=J2GIB8_9BACL
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
competence damage-inducible protein A; K03742 competence/damage-inducible protein CinA
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_15
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12943..13782
DNA (840bp) protein (280aa)
damage-inducible protein CinA n=1 Tax=Megamonas rupellensis RepID=UPI00035EFAE0
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
competence/damage-inducible protein CinA C-terminal domain
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_16
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13784..15160
DNA (1377bp) protein (459aa)
DNA repair exonuclease n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KPX0_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS23421.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
DNA repair exonuclease rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_17
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15223..16806
DNA (1584bp) protein (528aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GF42_9FIRM rbh
RNA helicase {ECO:0000313|EMBL:AHF06647.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
DNA/RNA helicase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_18
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16899..17933
DNA (1035bp) protein (345aa)
Protein RecA n=1 Tax=Thermincola potens (strain JR) RepID=D5XER8_THEPJ rbh
recA protein; K03553 recombination protein RecA rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_19
Clostridium sp. CAG:710, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17890..18396
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Succinispira mobilis RepID=UPI0003670404
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1262833 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:710.;"
recX; recombination regulator RecX; K03565 regulatory protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_20
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18862..20406
DNA (1545bp) protein (515aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
Ribonuclease Y n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IJR3_9FIRM rbh
phosphodiesterase; K06950 uncharacterized protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_21
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20517..21317
DNA (801bp) protein (267aa)
Metallophosphoesterase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LEX8_THEPS rbh
metallophosphoesterase rbh
Tax=BJP_IG2158_Thermincola_46_17
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_22
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21491..21709
DNA (219bp) protein (73aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Peptococcaceae RepID=A5D2N8_PELTS
SpoVS; hypothetical protein; K06416 stage V sporulation protein S
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAF59486.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_23
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21923..22855
DNA (933bp) protein (311aa)
dipeptidase (EC:3.4.13.19); K01273 membrane dipeptidase [EC:3.4.13.19] rbh
Dipeptidase {ECO:0000313|EMBL:ADU51181.1}; EC=3.4.13.19 {ECO:0000313|EMBL:ADU51181.1};; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Dipeptidase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SK40_THEM7 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_24
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22830..23690
DNA (861bp) protein (287aa)
PHP-like protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJJ0_MOOTA
PHP-like protein; K07053
PHP-like protein {ECO:0000313|EMBL:ABC19399.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_25
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23790..24056
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W3R1_DESAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV63847.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_26
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

24025..24639
DNA (615bp) protein (205aa)
adenosylcobinamide kinase; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] Tax=RBG_19FT_COMBO_JS1_35_14_curated
adenosylcobinamide-phosphate guanylyltransferase; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
Adenosylcobinamide-phosphate guanylyltransferase n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DUS3_DESRL
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_27
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

24706..25389
DNA (684bp) protein (228aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Flags: Precursor;; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
Cobalamin synthase n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V5Y8_THELD
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_28
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

25401..26027
DNA (627bp) protein (209aa)
alpha-ribazole phosphatase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Alpha-ribazole phosphatase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8D2_AMMDK
Alpha-ribazole phosphatase {ECO:0000313|EMBL:ACX52561.1}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1085_29
unknown

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26043..26354
DNA (312bp) protein (104aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1085_30
unknown

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26368..26457
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying items 1-30 of 47 in total

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