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08E140C01_z5_2013_Ig3399_v2_scaffold_1205

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_trna_1
unknown

Not on your lists

2..74
DNA (73bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_trna_2
unknown

Not on your lists

129..200
DNA (72bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_trna_3
unknown

Not on your lists

207..279
DNA (73bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_trna_4
unknown

Not on your lists

296..369
DNA (74bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_trna_5
unknown

Not on your lists

436..506
DNA (71bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_1
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

651..1577
DNA (927bp) protein (309aa)
hypothetical protein; K01501 nitrilase [EC:3.5.5.1] rbh
Predicted nitrilase {ECO:0000313|EMBL:EDK34037.1}; EC=3.5.5.1 {ECO:0000313|EMBL:EDK34037.1};; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
Predicted nitrilase n=2 Tax=Clostridium kluyveri RepID=A5MYU1_CLOK5 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_2
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1649..1798
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DZA4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO08354.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_3
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1871..3265
DNA (1395bp) protein (465aa)
Radical SAM domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XDN7_THEPJ rbh
radical SAM protein; K06871 uncharacterized protein rbh
Radical SAM domain protein {ECO:0000313|EMBL:ADG83783.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_4
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3508..4893
DNA (1386bp) protein (462aa)
Peptidase M23B n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RFT5_MOOTA
Uncharacterized protein {ECO:0000313|EMBL:KJS19970.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
peptidase M23B
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_5
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5033..5947
DNA (915bp) protein (305aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=1 Tax=Desulfosporosinus sp. OT RepID=G2FND0_9FIRM rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_6
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6227..7102
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5X951_THEPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG81051.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7217..8005
DNA (789bp) protein (263aa)
Putative Metallo-beta-lactamase family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F2Q5_9CLOT
Putative Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CDG02901.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
metallo-beta-lactamase superfamily protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_8
Staphylococcus simiae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8045..8524
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=911238 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcu
rlmH; rRNA large subunit m3Psi methyltransferase RlmH (EC:2.1.-.-); K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Staphylococcus simiae CCM 7213 RepID=G5JHG6_9STAP
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_9
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8653..9294
DNA (642bp) protein (214aa)
Regulatory protein TetR n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DK87_DESRL
regulatory protein TetR
Tax=BJP_IG2069_Clostridiales_42_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_10
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9233..9751
DNA (519bp) protein (173aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J9H1_DESRM
ybaK/ebsC protein; K03976 putative transcription regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_11
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9785..10567
DNA (783bp) protein (261aa)
2-oxoacid:ferredoxin oxidoreductase, delta subunit Tax=RBG_13_Deltaproteobacteria_49_15_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein id=1966969 bin=GWE2_Clostridiales_32_10 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
flavodoxin
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_12
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10600..11535
DNA (936bp) protein (312aa)
MoxR-like ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] rbh
Magnesium chelatase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CRI4_THEYO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS23254.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_13
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11537..12667
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67NI9_SYMTH
Uncharacterized protein {ECO:0000313|EMBL:KJS23213.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_14
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12670..13938
DNA (1269bp) protein (423aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS23212.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_15
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13998..15476
DNA (1479bp) protein (493aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] rbh
Carboxyl-terminal protease {ECO:0000313|EMBL:ADG80916.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ADG80916.1};; Flags: Precursor;; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
Carboxyl-terminal protease n=1 Tax=Thermincola potens (strain JR) RepID=D5X8D7_THEPJ rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_16
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15487..15990)
DNA (504bp) protein (168aa)
Heptaprenyl diphosphate synthase component I (EC:2.5.1.30)
Heptaprenyl diphosphate synthase component I n=3 Tax=Dehalobacter RepID=K4KYD1_9FIRM
Tax=BJP_IG2157_Desulfuromonadales_56_134
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_17
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16006..16380)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LW21_TEPAE
conserved exported protein of unknown function
Tax=BJP_IG2157_Desulfuromonadales_56_134
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_18
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16367..17431)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-G15 RepID=UPI000371F77C
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein
Tax=BJP_IG2157_Desulfuromonadales_56_134
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_19
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17453..18331)
DNA (879bp) protein (293aa)
Electron transport complex, RnfABCDGE type, B subunit n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S245_THEOJ
RnfABCDGE type electron transport complex subunit B
Tax=BJP_IG2157_Desulfuromonadales_56_134
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_20
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18354..18929)
DNA (576bp) protein (192aa)
RnfA n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GP16_EUBLK
protein RnfA; K03617 electron transport complex protein RnfA
Tax=BJP_IG2157_Desulfuromonadales_56_134
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_21
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18982..19626)
DNA (645bp) protein (215aa)
rnfE/nqrD n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B66DBC
RnfABCDGE type electron transport complex subunit E; K03613 electron transport complex protein RnfE
Tax=BJP_IG2157_Desulfuromonadales_56_134
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_22
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19664..20233)
DNA (570bp) protein (190aa)
RnfG n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GP18_EUBLK
protein RnfG; K03612 electron transport complex protein RnfG
Tax=BJP_IG2157_Desulfuromonadales_56_134
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_23
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20226..21185)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IEJ8_9FIRM rbh
rnfD; electron transport complex protein, subunit D rbh
Tax=BJP_IG2157_Desulfuromonadales_56_134
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_24
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21203..22531)
DNA (1329bp) protein (443aa)
Electron transport complex protein RnfC n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S240_THEOJ
RnfABCDGE type electron transport complex subunit C; K03615 electron transport complex protein RnfC
Tax=BJP_IG2157_Desulfuromonadales_56_134
08E140C01_z5_2013_Ig3399_v2_scaffold_1205_25
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22744..23640)
DNA (897bp) protein (299aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
Methylenetetrahydrofolate reductase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KG82_CLOPA rbh
5,10-methylenetetrahydrofolate reductase rbh
Displaying items 1-30 of 36 in total

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