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08E140C01_z5_2013_Ig3399_v2_scaffold_1476

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_1
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..232)
DNA (231bp) protein (77aa)
Putative iron-sulfur flavoprotein n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GQ35_CLOLD
iron-sulfur flavoprotein
Putative iron-sulfur flavoprotein {ECO:0000313|EMBL:ADK16126.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_2
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(705..1382)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037ECF1E
Uncharacterized protein {ECO:0000313|EMBL:KJF28193.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
putative hemolysin-III related protein; K11068 hemolysin III
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_3
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1468..2346)
DNA (879bp) protein (293aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS22710.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_4
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2530..2796)
DNA (267bp) protein (89aa)
Cell division topological specificity factor n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DL79_DESRL
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
cell division topological specificity factor MinE; K03608 cell division topological specificity factor
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_5
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2816..3613)
DNA (798bp) protein (266aa)
Site-determining protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IW97_DESMD rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
septum site-determining protein MinD rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_6
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3613..4308)
DNA (696bp) protein (232aa)
Probable septum site-determining protein MinC n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEW0_9FIRM
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
minC; septum site-determining protein; K03610 septum site-determining protein MinC
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_7
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4563..6626)
DNA (2064bp) protein (688aa)
Peptidoglycan glycosyltransferase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TBY3_HELMI rbh
peptidoglycan glycosyltransferase; K05515 penicillin-binding protein 2 rbh
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ABZ85256.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_8
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6659..7180)
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AWG6_SYNWW
hypothetical protein; K03571 rod shape-determining protein MreD
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_9
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7177..8076)
DNA (900bp) protein (300aa)
Cell shape-determining protein MreC n=1 Tax=Thermincola potens (strain JR) RepID=D5XBF3_THEPJ
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_10
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8085..9107)
DNA (1023bp) protein (341aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Thermincola potens (strain JR) RepID=D5XBF4_THEPJ rbh
Rod shape-determining protein MreB {ECO:0000313|EMBL:KJS19367.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_11
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9157..9867)
DNA (711bp) protein (237aa)
DNA repair protein RadC n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CP98_DESK7
DNA repair protein RadC; K03630 DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:AEG14035.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_12
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9871..10464)
DNA (594bp) protein (198aa)
Maf-like protein Toce_0738 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S277_THEOJ
maf protein; K06287 septum formation protein
Maf-like protein ALO_07918 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_13
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10494..10751)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GK37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJS19366.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_14
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10903..11532)
DNA (630bp) protein (210aa)
Redox-sensing transcriptional repressor Rex n=2 Tax=Desulfotomaculum RepID=F6B8L6_DESCC
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
redox-sensing transcriptional repressor rex; K01926 redox-sensing transcriptional repressor
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_15
unknown

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comp(11599..12429)
DNA (831bp) protein (277aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1476_16
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12492..13781)
DNA (1290bp) protein (430aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] rbh
FolC bifunctional protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XBG3_THEPJ rbh
FolC bifunctional protein {ECO:0000313|EMBL:ADG83392.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_17
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13793..16456)
DNA (2664bp) protein (888aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] rbh
Valine--tRNA ligase n=1 Tax=Thermincola potens (strain JR) RepID=D5XBG5_THEPJ rbh
Tax=BJP_IG2158_Thermincola_46_17
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_18
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16832..17281)
DNA (450bp) protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS19361.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_19
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17417..18397
DNA (981bp) protein (327aa)
ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J5K8_DESRM
ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component; K02051 NitT/TauT family transport system substrate-binding protein
ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component {ECO:0000313|EMBL:ABO50361.1}; Flags: Precursor;; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_20
unknown

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comp(18406..19167)
DNA (762bp) protein (254aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1476_21
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19353..20012
DNA (660bp) protein (220aa)
Putative prophage repressor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HR30_9FIRM
Putative prophage repressor {ECO:0000313|EMBL:EAX47536.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
XRE family transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_22
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20057..21238)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Paenisporosarcina sp. TG20 RepID=UPI00030DAA46 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS23078.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
opuAA; glycine betaine ABC transporter (ATP-binding protein) rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_23
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21248..22102)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Paenisporosarcina sp. TG20 RepID=UPI0002D5ADF4 rbh
Choline ABC transporter permease {ECO:0000313|EMBL:KJS23077.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
binding-protein-dependent transport system inner membrane protein; K02001 glycine betaine/proline transport system permease protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_24
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22206..22535)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MNH1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGG80811.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_25

Not on your lists

comp(22532..22990)
DNA (459bp) protein (153aa)
stress-responsive transcriptional regulator n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI000372FD18
Marine sediment metagenome DNA, contig: S06H3_L06246 {ECO:0000313|EMBL:GAI14401.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
stress-responsive transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_26
Paenibacillus sp. D9, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23034..23636)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037D8FFD
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=665792 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. D9.;"
protein EngB; K03978 GTP-binding protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1476_27
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23633..24952)
DNA (1320bp) protein (440aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W5T3_DESAS
Displaying 27 items

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