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08E140C01_z5_2013_Ig3399_v2_scaffold_1639

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_1
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1064
DNA (1062bp) protein (354aa)
choline dehydrogenase n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002F5A2BE rbh
putative flavoprotein related to choline dehydrogenase rbh
Choline dehydrogenase {ECO:0000313|EMBL:AHF09313.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_2
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1061..1777
DNA (717bp) protein (239aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XWU6_9FIRM rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EHQ90745.1}; Flags: Precursor;; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
transcriptional regulatory protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_3
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1774..3180
DNA (1407bp) protein (469aa)
Signal transduction histidine kinase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XWU5_9FIRM rbh
two-component sensor histidine kinase rbh
Tax=BJP_IG2103_Clostridiales_50_15
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_4
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3277..3888
DNA (612bp) protein (204aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPU4_CELLD rbh
isoprenylcysteine carboxyl methyltransferase rbh
Tax=BJP_IG2103_Clostridiales_50_15
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_5
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3922..4425
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUJ4_CLOSA
Uncharacterized protein {ECO:0000313|EMBL:KHO62945.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_6
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

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4561..4872
DNA (312bp) protein (104aa)
Putative transcriptional regulator n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7INI3_DESMD
PadR family transcriptional regulator {ECO:0000313|EMBL:KJS48401.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_7
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4873..6060
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IW90_DESMD rbh
Uncharacterized protein {ECO:0000313|EMBL:KGK86824.1}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP52.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_8
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6294..6674
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG78478.1}; Flags: Precursor;; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
hypothetical protein; K06889
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_9
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6693..7268
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG78478.1}; Flags: Precursor;; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
hypothetical protein; K06889
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_10
unknown

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7318..7515
DNA (198bp) protein (66aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1639_11
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7526..8359)
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TWX9_ALKMQ rbh
hypothetical protein; K15270 S-adenosylmethionine uptake transporter rbh
Uncharacterized protein {ECO:0000313|EMBL:ABR50697.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_12
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8694..9137
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH25_9FIRM
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_13
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9239..9814
DNA (576bp) protein (192aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
protein-L-isoaspartate and D-aspartate O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I2I6_9CLOT
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_14
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9815..10330
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Bacillus sp. 37MA RepID=UPI00037DE42D
Uncharacterized protein {ECO:0000313|EMBL:EJR26160.1}; TaxID=1053226 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD048.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_15

Not on your lists

10426..11244
DNA (819bp) protein (273aa)
Uncharacterized protein {ECO:0000313|EMBL:AHF24877.1}; TaxID=1393535 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig21.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_16
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11328..12629
DNA (1302bp) protein (434aa)
Major facilitator superfamily MFS_1 n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CMN2_SYNLT rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADI01967.1}; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_17
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12728..13825
DNA (1098bp) protein (366aa)
riboflavin biosynthesis protein RibD; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] rbh
Riboflavin biosynthesis protein RibD n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9T2_AMMDK rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_18
Heliobacillus mobilis, Heliobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13828..14478
DNA (651bp) protein (217aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase alpha chain {ECO:0000313|EMBL:AAN87464.1}; EC=2.5.1.9 {ECO:0000313|EMBL:AAN87464.1};; Flags: Fragment;; TaxID=28064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacillus.;" source="Heliobacillus mobilis.;"
Riboflavin synthase alpha chain (Fragment) n=1 Tax=Heliobacillus mobilis RepID=Q8GDW2_HELMO
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_19
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14494..15702
DNA (1209bp) protein (403aa)
GTP cyclohydrolase II (EC:3.5.4.25); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] rbh
Riboflavin biosynthesis protein RibBA n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RK05_MOOTA rbh
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_20
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15724..16194
DNA (471bp) protein (157aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|SAAS:SAAS00106234}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|SAAS:SAAS00106234};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TGT9_HELMI
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_21
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

16209..16868
DNA (660bp) protein (220aa)
putative hydrolase MhqD; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=GWB2_Clostridiales_37_7_curated
putative hydrolase MhqD; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Putative hydrolase, haloacid dehalogenase family protein id=2047967 bin=GWB2_Clostridiales_37_7 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_22
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17049..18521
DNA (1473bp) protein (491aa)
UPF0061 protein DOT_5188 n=1 Tax=Desulfosporosinus sp. OT RepID=G2FZM2_9FIRM rbh
UPF0061 protein DOT_5188 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_23
unknown

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18638..18751
DNA (114bp) protein (38aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1639_24
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18843..19181
DNA (339bp) protein (113aa)
Ferredoxin-dependent glutamate synthase n=1 Tax=Pelosinus fermentans JBW45 RepID=I8U3R9_9FIRM
Ferredoxin-dependent glutamate synthase {ECO:0000313|EMBL:AJQ28151.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
ferredoxin-dependent glutamate synthase
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_25
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19156..19341
DNA (186bp) protein (62aa)
Tax=BJP_IG2069_Clostridiales_42_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_26
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19570..20802
DNA (1233bp) protein (411aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TBY2_9CLOT rbh
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:EGD48153.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
DNA/RNA helicase, superfamily II rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_27
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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20971..21774
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFL5_9EURY rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFV24109.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R15.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_28
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21881..22630)
DNA (750bp) protein (250aa)
Prevent-host-death family protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCB9_9FIRM rbh
prevent-host-death family protein rbh
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_1639_29
unknown

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comp(22627..22773)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 29 items

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