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08E140C01_z5_2013_Ig3399_v2_scaffold_1926

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_1
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1603
DNA (1602bp) protein (534aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase 3 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DQM0_DESRL
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_2
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1658..2242
DNA (585bp) protein (195aa)
NADPH-dependent FMN reductase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M509_9CLOT
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EHI99458.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
multimeric flavodoxin WrbA
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_3
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2239..4152
DNA (1914bp) protein (638aa)
ABC transporter ATP-binding protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0III1_9FIRM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQB25651.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
ABC transporter-like protein; K15738 ATP-binding cassette, subfamily F, uup rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4342..5481
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase, short-chain specific {ECO:0000313|EMBL:CCQ94595.1}; EC=1.3.8.1 {ECO:0000313|EMBL:CCQ94595.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Acyl-CoA dehydrogenase, short-chain specific n=1 Tax=Clostridium ultunense Esp RepID=M1YVK8_9CLOT rbh
acyl-CoA dehydrogenase domain-containing protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_5
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5498..6286
DNA (789bp) protein (263aa)
Electron transfer flavoprotein subunit beta/FixA family protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AWP2_9CLOT rbh
Electron transfer flavoprotein subunit beta/FixA family protein {ECO:0000313|EMBL:CDA53259.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
electron transfer flavoprotein subunit alpha/beta; K03521 electron transfer flavoprotein beta subunit rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_6
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

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6299..7507
DNA (1209bp) protein (403aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A634_NATTJ rbh
electron transfer flavoprotein subunit alpha/beta; K03522 electron transfer flavoprotein alpha subunit rbh
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ACB85451.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_7
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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7574..7996
DNA (423bp) protein (141aa)
MaoC domain protein dehydratase n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HAR5_ILYPC
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ADO82066.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_8
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(8090..9340)
DNA (1251bp) protein (417aa)
6-phosphofructokinase (EC:2.7.1.90); K00850 6-phosphofructokinase [EC:2.7.1.11] rbh
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" so
Pyrophosphate-dependent phosphofructokinase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJ41_MOOTA rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_9
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9601..10734)
DNA (1134bp) protein (378aa)
Membrane protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJS21418.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
peptidase M23B
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_10
Bacillus vireti, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10895..11404
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0002D67DD5
Uncharacterized protein {ECO:0000313|EMBL:ETI69732.1}; TaxID=1131730 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus vireti LMG 21834.;"
membrane protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_11
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11545..13602)
DNA (2058bp) protein (686aa)
Transcriptional regulator n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASN9_9CLOT rbh
Transcriptional regulator {ECO:0000313|EMBL:EOD00178.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
PAS modulated Fis family sigma-54-specific transcriptional regulator rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_12
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14263..15420
DNA (1158bp) protein (386aa)
Extracellular solute-binding protein, family 7 n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXX5_TRURR
family 7 extracellular solute-binding protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_13
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15512..16042
DNA (531bp) protein (177aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXX6_TRURR
tripartite AtP-independent periplasmic transporter subunit DctQ
Tax=BJP_IG2069_Syntrophobacterales_47_18
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_14
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16042..17364
DNA (1323bp) protein (441aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXX7_TRURR
TRAP dicarboxylate transporter subunit DctM
Tax=BJP_IG2069_Syntrophobacterales_47_18
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_15
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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17588..19156
DNA (1569bp) protein (523aa)
propionate CoA-transferase (EC:2.8.3.1); K01026 propionate CoA-transferase [EC:2.8.3.1] rbh
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL).;"
Acetate CoA-transferase YdiF n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DM81_HALPG rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1926_16
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19236..19925
DNA (690bp) protein (230aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CDF58713.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDF58713.1};; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-[acyl-carrier protein] reductase n=2 Tax=Thermobrachium celere DSM 8682 RepID=R7RTU1_9CLOT
Displaying 16 items

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