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08E140C01_z5_2013_Ig3399_v2_scaffold_2029

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_1
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..639
DNA (639bp) protein (213aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:AEF93405.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AEF93405.1};; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
Asparagine synthetase n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DJU9_9FIRM
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_2
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(676..1254)
DNA (579bp) protein (193aa)
Metal dependent phosphohydrolase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CHF5_KOSOT
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACR79710.1}; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_trna_1
unknown

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1481..1562
DNA (82bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_3
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2104..5298)
DNA (3195bp) protein (1065aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F1X1_DESDL rbh
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:AGA67859.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
HsdR family type I site-specific deoxyribonuclease rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_4
Clostridium haemolyticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5389..6510)
DNA (1122bp) protein (374aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] rbh
Restriction modification system DNA specificity domain protein n=2 Tax=Geobacillus RepID=C9RZB1_GEOSY rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN04514.1}; TaxID=1443115 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium haemolyticum NCTC 8350.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_5
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6507..7523)
DNA (1017bp) protein (339aa)
Virulence protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F3V2_DESDL rbh
virulence protein rbh
Virulence protein {ECO:0000313|EMBL:AGA67857.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_6
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7513..9066)
DNA (1554bp) protein (518aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F5B2_DESDL rbh
type I restriction-modification system methyltransferase subunit rbh
N-6 DNA methylase {ECO:0000313|EMBL:KGP76290.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_7
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9078..10682)
DNA (1605bp) protein (535aa)
Restriction endonuclease S subunit n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F472_DESDL rbh
restriction endonuclease S subunit rbh
Restriction endonuclease S subunit {ECO:0000313|EMBL:AGA67855.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_8
unknown

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comp(11166..11366)
DNA (201bp) protein (67aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2029_9
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11367..11735
DNA (369bp) protein (123aa)
Site-specific recombinase XerD n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F5A6_DESDL
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AGA68220.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_10
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12071..12499)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CX05_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEW59045.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter sp. TrichCH4B.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_11
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12545..13048)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TSP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:GAE34065.1}; TaxID=1236973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus akibai (strain ATCC 43226 / DSM 21942 / JCM 9157 / 1139).;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_12
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13092..13592)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00037F4719
Restriction endonuclease {ECO:0000313|EMBL:EDS02531.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_13
unknown

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comp(14132..14464)
DNA (333bp) protein (111aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2029_14
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14566..16302)
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2BE11 rbh
superfamily II helicase Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
superfamily II helicase
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_15
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17054..17257)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F608_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGK86726.1}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP52.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_16
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17302..17502)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Caloramator australicus RC3 RepID=I7LH37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCJ33740.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_17
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17499..17966)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LTD7_TEPAE
Uncharacterized protein {ECO:0000313|EMBL:KJS18745.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_18
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17970..18281)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6B6_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KJS18745.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_19
GWE2_Clostridiales_32_10_curated, Clostridiales, Bacteria

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comp(18398..23338)
DNA (4941bp) protein (1647aa)
Uncharacterized protein id=1799711 bin=GWE2_Clostridiales_32_10 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales rbh
hypothetical protein Tax=GWE2_Clostridiales_32_10_curated
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23348..23566)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZK29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ94732.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2029_21
unknown

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comp(23629..23778)
DNA (150bp) protein (50aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2029_22
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23858..24415
DNA (558bp) protein (186aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GED2_9FIRM
Transposase IS116 {ECO:0000313|EMBL:AHF06214.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
transposase
Displaying 23 items

View Taxonomy