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08E140C01_z5_2013_Ig3399_v2_scaffold_2987

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2987_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..958)
DNA (957bp) protein (319aa)
Fibronectin type III domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKQ3_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:EDS01748.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
leucine-rich repeat-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2987_2
unknown

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1131..1289
DNA (159bp) protein (53aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2987_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1310..1558)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10361.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2987_4
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1663..2007)
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:ERI92762.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2987_5
Mycoplasma mycoides, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(1991..2614)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Mycoplasma mycoides subsp. mycoides SC (strain Gladysdale) RepID=D9QXF7_MYCMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJQ46526.1}; TaxID=2103 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma mycoides subsp. mycoides.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2987_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2764..3771)
DNA (1008bp) protein (336aa)
Phage integrase n=1 Tax=Clostridium botulinum (strain 657 / Type Ba4) RepID=C3KZP4_CLOB6 rbh
phage integrase; K04763 integrase/recombinase XerD rbh
Uncharacterized protein {ECO:0000313|EMBL:AJE10163.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2987_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3964..5478)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XQW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA11191.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
endolysin
08E140C01_z5_2013_Ig3399_v2_scaffold_2987_8
unknown

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comp(5495..5875)
DNA (381bp) protein (127aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2987_9
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5872..6210)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LDV4_RUMC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL17799.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2987_10
Paenibacillus sp. FSL P4-0081, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6277..8571)
DNA (2295bp) protein (765aa)
Prophage tail fiber family protein (Fragment) n=1 Tax=Escherichia coli STEC_MHI813 RepID=G2C7L9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AIQ26967.1}; TaxID=1536769 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL P4-0081.;"
side tail fiber protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2987_11
unknown

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comp(8584..8910)
DNA (327bp) protein (109aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2987_12
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8907..9152)
DNA (246bp) protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:EGX74346.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_2987_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9146..13294)
DNA (4149bp) protein (1383aa)
Glycosyl hydrolase family 25 n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3U2_9FIRM rbh
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:CDE21393.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2987_14
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13291..13983)
DNA (693bp) protein (231aa)
Putative phage tail component domain protein n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6QN45_9FIRM
Putative phage tail component domain protein {ECO:0000313|EMBL:CDC34399.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_2987_15
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13980..17189)
DNA (3210bp) protein (1070aa)
Phage tail tape measure protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCB0_ACEWD
phage tail tape measure protein
Phage tail tape measure protein {ECO:0000313|EMBL:AFA50225.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Displaying 15 items

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