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08E140C01_z5_2013_Ig3399_v2_scaffold_3050

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_1
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..882)
DNA (882bp) protein (294aa)
NIF3 (NGG1p interacting factor 3)-like protein n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LHW4_THEPS rbh
NIF3 (NGG1p interacting factor 3)-like protein rbh
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_2
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(911..1195)
DNA (285bp) protein (95aa)
Cell division protein ZapA n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LFC2_THEPS
zapA; cell division protein ZapA
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_3
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1281..3722)
DNA (2442bp) protein (814aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] rbh
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thermincola potens (strain JR) RepID=D5X7Z9_THEPJ rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_4
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3735..4757)
DNA (1023bp) protein (341aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
pheS; phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] rbh
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=SYFA_HELMI rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_5
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5220..6053)
DNA (834bp) protein (278aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QUE9_ACEAZ
RNA methyltransferase {ECO:0000313|EMBL:KJF28282.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_6
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6170..6523)
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A3Z0_DESDJ
50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_7
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6553..6750)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Clostridiales RepID=E0QH50_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_8
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6776..7237)
DNA (462bp) protein (154aa)
Translation initiation factor IF-3 n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W0F6_DESAS
translation initiation factor IF-3; K02520 translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_9
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7592..9496)
DNA (1905bp) protein (635aa)
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] rbh
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
Threonine--tRNA ligase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TEU3_HELMI rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_10
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(9924..10838)
DNA (915bp) protein (305aa)
Iron-sulfur binding protein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZQM4_THELI
Uncharacterized protein {ECO:0000313|EMBL:AIF69079.1}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
iron-sulfur binding protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_11
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11039..11497
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E6E8
Uncharacterized protein {ECO:0000313|EMBL:KAJ48741.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11569..12153)
DNA (585bp) protein (195aa)
Glyoxalase-like domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H1F6_9CLOT
Glyoxalase-like domain protein {ECO:0000313|EMBL:EJF39270.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
putative glyoxalase/bleomycin resistance protein/dioxygenase
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_13
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12099..12272)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:AAM32727.1}; TaxID=192952 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 /; JCM 11833 / OCM 88) (Methanosarcina frisia).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3050_14
unknown

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comp(12543..13079)
DNA (537bp) protein (179aa)

This feature has no annotations

Displaying 14 items

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