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08E140C01_z5_2013_Ig3399_v2_scaffold_3542

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3542_1
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1050
DNA (1050bp) protein (350aa)
ATP-dependent chaperone ClpB n=2 Tax=Desulfotomaculum RepID=F6B556_DESCC
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3542_2
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1312..1674
DNA (363bp) protein (121aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RYV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88916.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
GntR family transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_3542_3
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1671..2522
DNA (852bp) protein (284aa)
Putative ABC transport system ATP-binding protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHD8_ACEWD
putative ABC transport system ATP-binding protein
Putative ABC transport system ATP-binding protein {ECO:0000313|EMBL:AFA49648.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3542_4
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2535..3272
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TI56_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGD45991.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3542_5
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3351..4274)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NVB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AJQ29121.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_3542_6
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4434..5753)
DNA (1320bp) protein (440aa)
Short chain fatty acids transporter n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CL85_9CLOT
Short chain fatty acids transporter {ECO:0000313|EMBL:EOC99455.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
short-chain fatty acid transporter
08E140C01_z5_2013_Ig3399_v2_scaffold_3542_7
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5932..6588)
DNA (657bp) protein (219aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.9); K01035 acetate CoA-transferase beta subunit [EC:2.8.3.8]
Butyrate-acetoacetate CoA-transferase subunit B n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RR67_9CLOT
Acetate CoA-transferase {ECO:0000313|EMBL:KGG79839.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3542_8
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6590..7267)
DNA (678bp) protein (226aa)
3-oxoacid CoA-transferase subunit A; K01034 acetate CoA-transferase alpha subunit [EC:2.8.3.8]
3-oxoacid CoA-transferase, A subunit n=5 Tax=Pelosinus fermentans RepID=I8RBP3_9FIRM
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:EIW16458.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3542_9
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(7528..9627)
DNA (2100bp) protein (700aa)
Putative sigma54 specific transcriptional regulator n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QS50_ACEAZ rbh
sigma-54 specific transcriptional regulator rbh
Putative sigma54 specific transcriptional regulator {ECO:0000313|EMBL:ADL13341.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3542_10
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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comp(10044..11432)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00035F105C rbh
amino acid carrier protein; K03310 alanine or glycine:cation symporter, AGCS family Tax=GWC1_Treponema_61_84_curated
amino acid carrier protein; K03310 alanine or glycine:cation symporter, AGCS family rbh
Displaying 10 items

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