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08E140C01_z5_2013_Ig3399_v2_scaffold_3728

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3728_1
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1587)
DNA (1587bp) protein (529aa)
Two-component hybrid sensor and regulator n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XTG0_DESMR
two-component hybrid sensor and regulator
Tax=BJP_IG2157_Clostridiales_52_13
08E140C01_z5_2013_Ig3399_v2_scaffold_3728_2
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1888..3018
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI000379AE08 rbh
DNA adenine methylase {ECO:0000313|EMBL:CCY20835.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
DNA adenine methylase
08E140C01_z5_2013_Ig3399_v2_scaffold_3728_3
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3591..3803
DNA (213bp) protein (71aa)
Transcriptional regulator, XRE family n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W134_DESAS
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACV63430.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3728_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(3866..4792)
DNA (927bp) protein (309aa)
response regulator receiver modulated diguanylate cyclase/phosphodiesterase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Diguanylate cyclase (GGDEF) domain-containing protein id=1826225 bin=GWA2_Planctomycetia_40_7 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
response regulator receiver modulated diguanylate cyclase/phosphodiesterase
08E140C01_z5_2013_Ig3399_v2_scaffold_3728_5

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comp(4794..5264)
DNA (471bp) protein (157aa)
Response regulator, receiver n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FFU7_STIAD
Marine sediment metagenome DNA, contig: S01H4_S10108 {ECO:0000313|EMBL:GAG98432.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator, receiver
08E140C01_z5_2013_Ig3399_v2_scaffold_3728_6
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5255..7084)
DNA (1830bp) protein (610aa)
Sensory transduction histidine kinase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRB0_METAC
Sensory transduction histidine kinase {ECO:0000313|EMBL:AKB77524.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
sensory transduction histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_3728_7
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7129..9045)
DNA (1917bp) protein (639aa)
HD-GYP domain-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AXC6_SYNWW rbh
HD-GYP domain-containing protein rbh
HD-GYP domain-like protein {ECO:0000313|EMBL:ABI68628.1}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_3728_8
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9079..9522)
DNA (444bp) protein (148aa)
Chemotaxis protein, CheW-like protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXT7_CLOA9
Uncharacterized protein {ECO:0000313|EMBL:KJS20570.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
chemotaxis protein, CheW-like protein
08E140C01_z5_2013_Ig3399_v2_scaffold_3728_9
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9597..11141)
DNA (1545bp) protein (515aa)
Methyl-accepting chemotaxis sensory transducer with Cache sensor n=2 Tax=Desulfitobacterium hafniense RepID=B8G2H9_DESHD rbh
hypothetical protein; K03406 methyl-accepting chemotaxis protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAE83920.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
Displaying 9 items

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