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08E140C01_z5_2013_Ig3399_v2_scaffold_7236

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_7236_1
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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1..921
DNA (921bp) protein (307aa)
mucB; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV id=3382379 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
Tax=BJP_IG2102_Acholeplasmatales_34_18
08E140C01_z5_2013_Ig3399_v2_scaffold_7236_2
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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867..2372
DNA (1506bp) protein (502aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CCO07958.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CCO07958.1};; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E8W7_9FIRM
08E140C01_z5_2013_Ig3399_v2_scaffold_7236_3
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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2577..3098
DNA (522bp) protein (174aa)
UPF0316 protein TepiRe1_0655 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LVU0_TEPAE
UPF0316 protein VR72_18785 {ECO:0000256|HAMAP-Rule:MF_01515}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_7236_4
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3136..3954
DNA (819bp) protein (273aa)
murI; glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
Glutamate racemase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TFH8_HELMI
08E140C01_z5_2013_Ig3399_v2_scaffold_7236_5
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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4015..4755
DNA (741bp) protein (247aa)
ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] rbh
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
ribonuclease PH n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00036F7BFC rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_7236_6
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

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4745..5365
DNA (621bp) protein (207aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Pepto
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (EC:3.6.1.15); K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AB92_THEID
08E140C01_z5_2013_Ig3399_v2_scaffold_7236_trna_1
unknown

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5412..5485
DNA (74bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_7236_trna_2
unknown

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5496..5568
DNA (73bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_7236_trna_3
unknown

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5575..5647
DNA (73bp)
transferRNA
Displaying 9 items

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