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08E140C01_z5_2013_Ig3399_v2_scaffold_807

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_807_1
unknown

Not on your lists

3..74
DNA (72bp) protein (24aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_807_2
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


409..720
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Desulfurispora thermophila RepID=UPI0003703FAA
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
Tax=BJP_IG2158_Thermincola_46_17
08E140C01_z5_2013_Ig3399_v2_scaffold_807_3
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


764..1390
DNA (627bp) protein (209aa)
50S ribosomal protein L3 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL3_CARHZ rbh
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 rbh
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_4
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1418..2041
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DPC3_DESRL rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_807_5
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2042..2326
DNA (285bp) protein (95aa)
50S ribosomal protein L23 n=1 Tax=Thermincola potens (strain JR) RepID=D5XA85_THEPJ
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_6
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2357..3190
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=RL2_DESHD rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_807_7
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3222..3506
DNA (285bp) protein (95aa)
30S ribosomal protein S19 n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W3Y9_DESAS
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_8
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3532..3885
DNA (354bp) protein (118aa)
50S ribosomal protein L22 n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A4L0_DESDJ
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_9
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


3886..4554
DNA (669bp) protein (223aa)
30S ribosomal protein S3 n=1 Tax=Thermincola potens (strain JR) RepID=D5XA89_THEPJ rbh
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_10
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4541..4975
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJL6_SYNLT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
08E140C01_z5_2013_Ig3399_v2_scaffold_807_11
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4953..5168
DNA (216bp) protein (72aa)
50S ribosomal protein L29 n=4 Tax=Thermoanaerobacterium RepID=D9TRW2_THETC
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
08E140C01_z5_2013_Ig3399_v2_scaffold_807_12
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5203..5463
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=RS17_PELTS
RpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_13
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5480..5848
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Clostridium sp. CAG:167 RepID=R5WFH6_9CLOT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
08E140C01_z5_2013_Ig3399_v2_scaffold_807_14
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


5891..6217
DNA (327bp) protein (109aa)
50S ribosomal protein L24 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=RL24_MOOTA
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_15
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6245..6787
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=RL5_DESHY
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
08E140C01_z5_2013_Ig3399_v2_scaffold_807_16
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6819..7004
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=2 Tax=environmental samples RepID=R5H6E2_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
Ribosomal protein S14
08E140C01_z5_2013_Ig3399_v2_scaffold_807_17
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7036..7434
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=RS8_PELTS
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
08E140C01_z5_2013_Ig3399_v2_scaffold_807_18
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7470..8015
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=RL6_HELMI
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
Tax=BJP_08E140C01_Clostridiales_46_19
08E140C01_z5_2013_Ig3399_v2_scaffold_807_19
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8059..8427
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VSI5_CLOSH
ribosomal protein L18P
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_20
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8458..8958
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=RS5_DESRM
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_21
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


8968..9153
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQM9_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
08E140C01_z5_2013_Ig3399_v2_scaffold_807_22
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


9172..9615
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN0_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
ribosomal protein L15, bacterial/organelle
08E140C01_z5_2013_Ig3399_v2_scaffold_807_23
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9616..10872
DNA (1257bp) protein (419aa)
Protein translocase subunit SecY n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TC76_HELMI rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_807_24
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10905..11552
DNA (648bp) protein (216aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] rbh
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermi
Adenylate kinase n=1 Tax=Thermincola potens (strain JR) RepID=D5X8B2_THEPJ rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_807_25
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11555..12301
DNA (747bp) protein (249aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
map; methionine aminopeptidase, type i; K01265 methionyl aminopeptidase [EC:3.4.11.18] rbh
Methionine aminopeptidase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TC78_HELMI rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_807_26
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12409..12627
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=4 Tax=Desulfosporosinus RepID=G7W9Z0_DESOD
translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_27
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12933..13304
DNA (372bp) protein (124aa)
30S ribosomal protein S13 n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GHF1_9FIRM
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_28
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13323..13718
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJJ6_SYNLT
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_29
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13734..14360
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Thermincola potens (strain JR) RepID=D5XAB0_THEPJ rbh
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_807_30
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14415..15362
DNA (948bp) protein (316aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Thermincola potens (strain JR) RepID=D5XAB1_THEPJ rbh
Displaying items 1-30 of 75 in total

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