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08E140C01_z5_2013_Ig3399_v2_scaffold_4020

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_1
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..176
DNA (174bp) protein (58aa)
Serine/threonine protein phosphatase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EF31_THECK
serine/threonine protein phosphatase
Tax=BJP_IG2157_Clostridiales_52_13
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_2
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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223..2052
DNA (1830bp) protein (610aa)
serine/threonine protein kinase with PASTA sensor(s) (EC:2.7.11.25); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] rbh
Serine/threonine protein kinase with PASTA sensor(S) n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKW6_DESK7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS20944.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_3
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2003..2950
DNA (948bp) protein (316aa)
ribosome small subunit-dependent GTPase A; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] rbh
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VZY8_DESAS rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_4
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2953..3609
DNA (657bp) protein (219aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
Ribulose-phosphate 3-epimerase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J590_DESRM
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_5
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

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3641..4288
DNA (648bp) protein (216aa)
thiamine diphosphokinase; K00949 thiamine pyrophosphokinase [EC:2.7.6.2]
Thiamine pyrophosphokinase n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I9AG93_9THEO
Uncharacterized protein {ECO:0000313|EMBL:KJS13881.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_6
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4357..4551)
DNA (195bp) protein (65aa)
50S ribosomal protein L28 n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W566_DESAS
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_7
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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4677..5651
DNA (975bp) protein (325aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
BirA, biotin-[acetyl-CoA-carboxylase] ligase region n=1 Tax=Clostridium termitidis CT1112 RepID=S0FN05_9CLOT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_8
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5696..6970
DNA (1275bp) protein (425aa)
Anion transporter n=5 Tax=Pelosinus fermentans RepID=I8SVW9_9FIRM rbh
Anion transporter {ECO:0000313|EMBL:EIW20849.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
anion transporter rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_9
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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7302..7706
DNA (405bp) protein (135aa)
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP31_9FIRM
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KJS18963.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_10
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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7736..9286
DNA (1551bp) protein (517aa)
Carboxyl transferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP30_9FIRM rbh
Methylmalonyl-CoA carboxyltransferase {ECO:0000313|EMBL:KJS18962.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
propionyl-CoA carboxylase carboxyltransferase subunit rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_11
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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9318..9665
DNA (348bp) protein (116aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_12
Selenomonas noxia, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9700..10098
DNA (399bp) protein (133aa)
Biotin-requiring enzyme {ECO:0000313|EMBL:EFF66387.1}; EC=4.1.1.70 {ECO:0000313|EMBL:EFF66387.1};; TaxID=585503 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas noxia ATCC 43541.;"
Biotin-requiring enzyme n=2 Tax=Selenomonas noxia RepID=D4S5U3_9FIRM
biotin/lipoyl attachment domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_4020_13
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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10139..10318
DNA (180bp) protein (60aa)
sodium ion-translocating decarboxylase subunit beta; K01572 oxaloacetate decarboxylase, beta subunit [EC:4.1.1.3]
Glutaconyl-CoA decarboxylase beta subunit n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NQC3_9FIRM
Glutaconyl-CoA decarboxylase subunit beta {ECO:0000313|EMBL:KJS18959.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
Displaying 13 items

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