ggKbase home page

Ig3397_v2_scaffold_832

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_832_1
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2..271)
DNA (270bp) protein (90aa)
Zinc finger, UBP-type n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A508_THECD
zinc finger, UBP-type
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig3397_v2_scaffold_832_2
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

402..1508
DNA (1107bp) protein (369aa)
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7); K05396 D-cysteine desulfhydrase [EC:4.4.1.15] id=1241688 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7); K05396 D-cysteine desulfhydrase [EC:4.4.1.15]
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig3397_v2_scaffold_832_3

Not on your lists

1505..2518
DNA (1014bp) protein (338aa)
L-threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5]
Threonine aldolase {ECO:0000313|EMBL:KGA16034.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
Aromatic amino acid beta-eliminating lyase/threonine aldolase id=4018519 bin=GWF2_Bacteroidetes_49_14 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Ig3397_v2_scaffold_832_4
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2502..3728)
DNA (1227bp) protein (409aa)
Glucose/sorbosone dehydrogenase-like protein id=2147965 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig3397_v2_scaffold_832_5
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3725..4024)
DNA (300bp) protein (100aa)
bacterioferritin comigratory protein n=1 Tax=Thermus oshimai RepID=UPI000375D487
Peroxiredoxin
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig3397_v2_scaffold_832_6
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4058..4207)
DNA (150bp) protein (50aa)
Tax=RBG_16_RIF_CHLX_70_13_curated
Ig3397_v2_scaffold_832_7
unknown

Not on your lists

4346..4801
DNA (456bp) protein (152aa)

This feature has no annotations

Ig3397_v2_scaffold_832_8
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

4817..5575
DNA (759bp) protein (253aa)
Membrane protein, putative n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TAB0_HELMI
hypothetical protein; K07150
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig3397_v2_scaffold_832_9
Slackia sp. CM382, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5661..6128
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Slackia sp. CM382 RepID=J6IDS4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJU32770.1}; TaxID=1111137 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia sp. CM382.;"
hypothetical protein
Ig3397_v2_scaffold_832_10
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

6281..6838
DNA (558bp) protein (186aa)
Tax=GWC2_SYX_53_9_curated
Ig3397_v2_scaffold_832_11
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

6851..7366
DNA (516bp) protein (172aa)
Stress-responsive transcriptional regulator id=2547882 bin=GWF1_Spirochaetes_51_8 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
hypothetical protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig3397_v2_scaffold_832_12
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

7406..8029
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002FDE09B
hypothetical protein
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig3397_v2_scaffold_832_13
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

8046..8774
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248D292
hypothetical protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig3397_v2_scaffold_832_14
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8970..9671)
DNA (702bp) protein (234aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BQJ8_9ACTN
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig3397_v2_scaffold_832_15
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10137..12194
DNA (2058bp) protein (686aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:ACI97767.1}; EC=1.17.4.2 {ECO:0000313|EMBL:ACI97767.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
nrdD; anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] rbh
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQN1_RHOCS rbh
Ig3397_v2_scaffold_832_16
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12206..12400
DNA (195bp) protein (65aa)
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG19176.1}; EC=3.3.1.1 {ECO:0000313|EMBL:AJG19176.1};; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
Putative uncharacterized protein n=3 Tax=Acidithiobacillus RepID=B5ENP9_ACIF5
hypothetical protein
Ig3397_v2_scaffold_832_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12384..13103
DNA (720bp) protein (240aa)
Ribonucleoside-triphosphate reductase, anaerobic-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210Y1_RHOPB
ribonucleoside-triphosphate reductase, anaerobic-like
Ribonucleoside-triphosphate reductase, anaerobic-like {ECO:0000313|EMBL:ABD89055.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Ig3397_v2_scaffold_832_18
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

13245..16709
DNA (3465bp) protein (1155aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] rbh
Transcription-repair-coupling factor n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WGM0_EGGLE rbh
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig3397_v2_scaffold_832_19
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

16714..17694
DNA (981bp) protein (327aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Thermincola potens (strain JR) RepID=D5X9J7_THEPJ
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig3397_v2_scaffold_832_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17720..18505
DNA (786bp) protein (262aa)
MazG family protein n=1 Tax=Clostridium difficile F501 RepID=T4BBM6_CLODI
MazG family protein {ECO:0000313|EMBL:EQI07477.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
MazG family protein; K02499 tetrapyrrole methylase family protein / MazG family protein
Ig3397_v2_scaffold_832_21
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18498..19793
DNA (1296bp) protein (432aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
hypothetical protein; K01689 enolase [EC:4.2.1.11] rbh
Enolase n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YMK6_9ACTN rbh
Ig3397_v2_scaffold_832_22
unknown

Not on your lists

19822..20712
DNA (891bp) protein (297aa)

This feature has no annotations

Ig3397_v2_scaffold_832_23
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

20775..22172
DNA (1398bp) protein (466aa)
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WSS5_KYRT2
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig3397_v2_scaffold_832_24
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

22561..22917
DNA (357bp) protein (119aa)
Septum formation initiator n=1 Tax=Eggerthella sp. CAG:209 RepID=R6HFK2_9ACTN
putative septum formation initiator
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig3397_v2_scaffold_832_25
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

23028..23441
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Thermotoga sp. (strain RQ2) RepID=B1L842_THESQ
hypothetical protein; K09009 hypothetical protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig3397_v2_scaffold_832_26
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

23441..24388
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YY04_9ACTN
Exopolyphosphatase
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig3397_v2_scaffold_832_trna_1
unknown

Not on your lists

24411..24494
DNA (84bp)
transferRNA
Ig3397_v2_scaffold_832_27
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

24598..25251
DNA (654bp) protein (218aa)
Cobalamin B12-binding domain protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ANX7_PELPD
cobalamin B12-binding domain-containing protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig3397_v2_scaffold_832_28
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

25248..26411
DNA (1164bp) protein (388aa)
TPR repeats containing protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5V3_METCZ
TPR repeats containing protein
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig3397_v2_scaffold_832_29
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

26414..28417
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A0ADQ8_STRAM
beta-galactosidase trimerisation domain-containing protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
Displaying items 1-30 of 36 in total

View Taxonomy