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Ig3397_v2_scaffold_2616

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_2616_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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1..249
DNA (249bp) protein (83aa)
id=3679463 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2616_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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259..2148
DNA (1890bp) protein (630aa)
Uncharacterized protein id=2783954 bin=GWB1_CP_36_13 species=Leptospira meyeri genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2616_3
unknown

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comp(2141..2518)
DNA (378bp) protein (126aa)

This feature has no annotations

Ig3397_v2_scaffold_2616_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(2610..3452)
DNA (843bp) protein (281aa)
Transcription activator, effector binding id=3550840 bin=GWB1_CP_36_13 species=Clostridium beijerinckii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
transcriptional regulator, MerR family
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2616_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(3545..3985)
DNA (441bp) protein (147aa)
id=3834695 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2616_6
unknown

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comp(3982..4467)
DNA (486bp) protein (162aa)

This feature has no annotations

Ig3397_v2_scaffold_2616_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(4576..5055)
DNA (480bp) protein (160aa)
id=3834695 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2616_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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5816..8473
DNA (2658bp) protein (886aa)
cheA; chemotaxis histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
Chemotaxis histidine kinase id=3834698 bin=GWB1_CP_36_13 species=unknown genus=Borrelia taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2616_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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8501..9751
DNA (1251bp) protein (417aa)
Protein-glutamate O-methyltransferase id=3834700 bin=GWB1_CP_36_13 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2616_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

9753..10214
DNA (462bp) protein (154aa)
CheC domain protein id=3834702 bin=GWB1_CP_36_13 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
cheC2; chemotaxis protein CheC; K03409 chemotaxis protein CheX
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2616_11
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

10237..10665
DNA (429bp) protein (143aa)
Response regulator receiver protein id=3834704 bin=GWB1_CP_36_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2616_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

10820..11422
DNA (603bp) protein (201aa)
aco; aconitate hydratase; K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitase id=3526011 bin=GWB1_CP_36_13 species=Thermoplasmatales archaeon SCGC AB-539-N05 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Displaying 12 items

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