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Ig3397_v2_scaffold_2778

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_2778_1
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..400)
DNA (399bp) protein (133aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C5A2_NITHN
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ADE15325.1}; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Ig3397_v2_scaffold_2778_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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752..2035
DNA (1284bp) protein (428aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3]
dihydroorotase id=4084027 bin=GWB1_CP_36_13 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2778_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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2053..3135
DNA (1083bp) protein (361aa)
carA; carbamoyl phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase small chain id=4084025 bin=GWB1_CP_36_13 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2778_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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3135..4136
DNA (1002bp) protein (334aa)
signal transduction histidine kinase, LytS id=4084023 bin=GWB1_CP_36_13 species=Anabaena cylindrica genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2778_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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4350..6398
DNA (2049bp) protein (683aa)
anaerobic ribonucleoside triphosphate reductase; K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2]
Ribonucleoside-triphosphate reductase, anaerobic id=4084021 bin=GWB1_CP_36_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2778_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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6409..7263
DNA (855bp) protein (285aa)
Nitroreductase fused to ferredoxin domain protein id=3096358 bin=GWB1_CP_36_13 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
nitroreductase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2778_7
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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7456..8013
DNA (558bp) protein (186aa)
bacterioferritin comigratory protein/NADH dehydrogenase id=16916818 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
nitroreductase
Tax=RBG_13_Euryarchaeota_31_8_curated
Ig3397_v2_scaffold_2778_8
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

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comp(8075..9421)
DNA (1347bp) protein (449aa)
glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
Glutamate dehydrogenase id=3839988 bin=GWF2_Lentisphaerae_49_21 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good + rbh
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
Ig3397_v2_scaffold_2778_9
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9610..11679)
DNA (2070bp) protein (690aa)
nuoG; NADH-quinone oxidoreductase subunit G 2 (EC:1.6.99.5)
2Fe-2S iron-sulfur cluster binding domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F4S4_9DELT rbh
2Fe-2S iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:EFK09230.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
Ig3397_v2_scaffold_2778_10
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11676..13403)
DNA (1728bp) protein (576aa)
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.5.3); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] rbh
Putative NAD-dependent formate dehydrogenase, beta subunit n=1 Tax=delta proteobacterium NaphS2 RepID=D8F4S3_9DELT rbh
Putative NAD-dependent formate dehydrogenase, beta subunit {ECO:0000313|EMBL:EFK09222.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
Displaying 10 items

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