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Ig3397_v2_scaffold_542

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_542_1
unknown

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2..79
DNA (78bp) protein (26aa)

This feature has no annotations

Ig3397_v2_scaffold_542_2
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(735..1118)
DNA (384bp) protein (128aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Ig3397_v2_scaffold_542_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(1099..1431)
DNA (333bp) protein (111aa)
DNA polymerase beta subunit n=1 Tax=uncultured bacterium RepID=K2A312_9BACT
DNA polymerase subunit beta
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Ig3397_v2_scaffold_542_4
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1689..2489
DNA (801bp) protein (267aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
KR domain protein id=2204845 bin=GWB2_Desulfobacterales_56_26 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Tax=BJP_IG2069_Syntrophobacterales_47_18
Ig3397_v2_scaffold_542_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

2712..3098
DNA (387bp) protein (129aa)
Acetyltransferase id=3662546 bin=GWB1_CP_36_13 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
acetyltransferase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_6
unknown

Not on your lists

comp(3173..3271)
DNA (99bp) protein (33aa)

This feature has no annotations

Ig3397_v2_scaffold_542_7
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3304..4434)
DNA (1131bp) protein (377aa)
Filamentation induced by cAMP protein Fic id=2574230 bin=GWF1_Xanthomonadales_69_6 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
fic rbh
Tax=GWF1_Xanthomonadales_69_6_curated
Ig3397_v2_scaffold_542_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(4554..5918)
DNA (1365bp) protein (455aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=3749480 bin=GWB1_CP_36_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
two component, sigma54 specific, transcriptional regulator, Fis family; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(5920..6297)
DNA (378bp) protein (126aa)
Chaperone protein DnaJ id=3749479 bin=GWB1_CP_36_13 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_10
unknown

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6490..6813
DNA (324bp) protein (108aa)

This feature has no annotations

Ig3397_v2_scaffold_542_11
unknown

Not on your lists

comp(6959..7084)
DNA (126bp) protein (42aa)

This feature has no annotations

Ig3397_v2_scaffold_542_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(7115..9046)
DNA (1932bp) protein (644aa)
molecular chaperone DnaK n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000362C728
chaperone protein DnaK; K04043 molecular chaperone DnaK
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_13
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(9108..9746)
DNA (639bp) protein (213aa)
Heat shock protein GrpE id=3749476 bin=GWB1_CP_36_13 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
GrpE protein; K03687 molecular chaperone GrpE
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_14
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(9833..10165)
DNA (333bp) protein (111aa)
Heat shock protein Hsp20 family protein id=3749475 bin=GWB1_CP_36_13 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
heat shock protein Hsp20
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_15
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(10180..10590)
DNA (411bp) protein (137aa)
Molecular chaperone (Small heat shock protein) id=3749474 bin=GWB1_CP_36_13 species=unknown genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
heat shock protein; K13993 HSP20 family protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_16
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(10607..11056)
DNA (450bp) protein (150aa)
Heat shock protein Hsp20 id=3749473 bin=GWB1_CP_36_13 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
HspC2 heat shock protein; K13993 HSP20 family protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_17
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

11563..12258
DNA (696bp) protein (232aa)
id=3960308 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_18
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

12248..12775
DNA (528bp) protein (176aa)
id=3960307 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_19
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

12768..13862
DNA (1095bp) protein (365aa)
Thiamine biosynthesis protein ThiH id=3960306 bin=GWB1_CP_36_13 species=unknown genus=Oceanimonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
thiH; thiamine biosynthesis protein ThiH; K03150 thiamine biosynthesis ThiH
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_20
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

13876..14694
DNA (819bp) protein (273aa)
Electron transfer flavoprotein subunit beta id=3960313 bin=GWB1_CP_36_13 species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
etfB; electron transfer flavoprotein beta-subunit
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_21
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

14879..16084
DNA (1206bp) protein (402aa)
poly(R)-hydroxyalkanoic acid synthase subunit PhaC; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit id=3960314 bin=GWB1_CP_36_13 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_22
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

16395..17564
DNA (1170bp) protein (390aa)
Branched-chain amino acid ABC transporter permease id=3960315 bin=GWB1_CP_36_13 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
ABC transporter; K01997 branched-chain amino acid transport system permease protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_23
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

17592..18734
DNA (1143bp) protein (381aa)
Branched-chain amino acid ABC transporter permease protein id=3960316 bin=GWB1_CP_36_13 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_24
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

18740..19540
DNA (801bp) protein (267aa)
Monosaccharide-transporting ATPase id=3960317 bin=GWB1_CP_36_13 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_25
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

19542..20387
DNA (846bp) protein (282aa)
ABC transporter related protein id=3960318 bin=GWB1_CP_36_13 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
livF; leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_26
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

20567..24943
DNA (4377bp) protein (1459aa)
Sensory transduction histidine kinase id=3960319 bin=GWB1_CP_36_13 species=Clostridium novyi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
putative ATPase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_27
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

24927..27182
DNA (2256bp) protein (752aa)
ptsP; PTS system, enzyme I, transcriptional regulator PtsP; K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
Putative phytochrome sensor protein id=3960345 bin=GWB1_CP_36_13 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_542_28
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

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comp(27240..28145)
DNA (906bp) protein (302aa)
Uncharacterized protein (Fragment) n=1 Tax=Strongylocentrotus purpuratus RepID=H3HNX2_STRPU
similar to ankyrin 2,3/unc44
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_003370-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
Ig3397_v2_scaffold_542_29
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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28321..28635
DNA (315bp) protein (105aa)
Trp operon repressor n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QS51_SPHPG
Trp operon repressor; K03720 TrpR family transcriptional regulator, trp operon repressor
Trp operon repressor {ECO:0000313|EMBL:AEV28912.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Ig3397_v2_scaffold_542_30
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(28624..29826)
DNA (1203bp) protein (401aa)
Putative uncharacterized protein id=2535577 bin=GWB1_CP_36_13 species=Fusobacterium mortiferum genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
exopolysaccharide biosynthesis protein
Tax=GWB1_Spirochaetes_36_13_curated
Displaying items 1-30 of 55 in total

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