ggKbase home page

Ig5181_scaffold_51478

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5181_scaffold_51478_1
unknown

Not on your lists

comp(2..103)
DNA (102bp) protein (34aa)

This feature has no annotations

Ig5181_scaffold_51478_2
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(113..499)
DNA (387bp) protein (129aa)
Integral membrane protein bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_51478_3
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(483..1478)
DNA (996bp) protein (332aa)
Putative uncharacterized protein bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Ribosomal protein S5 domain 2-type fold
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_51478_4
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

Not on your lists

comp(1462..1935)
DNA (474bp) protein (158aa)
Deoxycytidylate deaminase bin=GWA2_Tenericute_38_26 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
comEB; Deoxycytidylate deaminase
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_51478_5
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

Not on your lists

comp(1932..2432)
DNA (501bp) protein (167aa)
msrA; methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA bin=GWF1_Tenericute_35_14 species=Sebaldella termitidis genus=Sebaldella taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_51478_6
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists


comp(2432..4147)
DNA (1716bp) protein (572aa)
aspS; Aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase bin=GWC2_Tenericute_34_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_51478_7
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

Not on your lists


comp(4149..5417)
DNA (1269bp) protein (423aa)
hisS; Histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_51478_8
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(5404..5976)
DNA (573bp) protein (191aa)
Putative acetyltransferase, GNAT family bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
GCN5-related N-acetyltransferase
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_51478_9
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

Not on your lists

comp(6222..6656)
DNA (435bp) protein (145aa)
dtd; D-tyrosyl-tRNA(Tyr) deacylase (EC:3.5.1.-)
D-tyrosyl-tRNA(Tyr) deacylase bin=GWA2_Tenericute_38_26 species=unknown genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_51478_10
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(6653..8830)
DNA (2178bp) protein (726aa)
spoT; Guanosine polyphosphate pyrophosphohydrolase/synthetase (EC:3.1.7.2)
Guanosine polyphosphate pyrophosphohydrolase/synthetase bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_51478_11
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(8842..9354)
DNA (513bp) protein (171aa)
apt; Adenine phosphoribosyltransferase (APRT) (EC:2.4.2.7)
Adenine phosphoribosyltransferase bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_51478_12
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

9448..10698
DNA (1251bp) protein (417aa)
Holliday junction DNA helicase-like ATPase bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
Holliday junction, RuvB type
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Ig5181_scaffold_51478_13
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(10754..12427)
DNA (1674bp) protein (558aa)
Metallo-beta-lactamase family protein bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
rnjA1; Ribonuclease J
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Ig5181_scaffold_51478_14
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

12489..13070
DNA (582bp) protein (194aa)
Holliday junction resolvase RecU bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
recU; Holliday junction resolvase RecU
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_51478_15
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(13049..13741)
DNA (693bp) protein (231aa)
Putative proton-coupled thiamine transporter bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
thiT; Thiamine transporter ThiT/Yuaj
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_51478_16
unknown

Not on your lists

comp(13738..13881)
DNA (144bp) protein (48aa)

This feature has no annotations

Ig5181_scaffold_51478_17
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

13965..14408
DNA (444bp) protein (148aa)
id=2906014 bin=GWF1_Tenericute_35_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_51478_18
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

14486..14860
DNA (375bp) protein (125aa)
Putative uncharacterized protein bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_51478_19
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

14862..15284
DNA (423bp) protein (141aa)
Hypothetical membrane-anchored protein bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
nfeD; Nodulation efficiency family protein, NfeD
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_51478_20
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

15307..15795
DNA (489bp) protein (163aa)
Conserved hypothetical surface-anchored protein bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_51478_21
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

15782..16273
DNA (492bp) protein (164aa)
Conserved hypothetical surface-anchored protein bin=GWC2_Tenericute_34_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
hypothetical protein
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Ig5181_scaffold_51478_22
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(16332..17219)
DNA (888bp) protein (296aa)
Type I phosphodiesterase/nucleotide pyrophosphatase bin=GWF2_Tenericutes_35_184 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
Type I phosphodiesterase / nucleotide pyrophosphatase
Tax=BJP_IG2102_Acholeplasmatales_34_18
Displaying 22 items

View Taxonomy