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Ig5181_scaffold_70295

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5181_scaffold_70295_1
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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3..650
DNA (648bp) protein (216aa)
Glycogen branching enzyme bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
glgB; Glycogen (1,4-alpha-glucan) branching enzyme
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_70295_2
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(680..1651)
DNA (972bp) protein (324aa)
Transcription regulator, LacI family bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
LacI family transcription regulator
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_70295_3
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(1655..3448)
DNA (1794bp) protein (598aa)
Alpha-amylase Tax=Acholeplasma laidlawii (strain PG-8A) RepID=A9NFZ3_ACHLI
nplT; putative Neopullulanase
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_70295_4
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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3564..5261
DNA (1698bp) protein (566aa)
Alpha-amylase bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
malL; putative oligo-1,6-glucosidase
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_70295_5
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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5258..6739
DNA (1482bp) protein (494aa)
4-alpha-glucanotransferase bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
malQ; putative 4-alpha-glucanotransferase
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_70295_6
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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6763..7767
DNA (1005bp) protein (335aa)
Putative glucan 1,3-beta-glucosidase bin=GWA2_Tenericute_38_26 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Glycoside hydrolase, family 5
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_70295_7
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

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comp(7814..8566)
DNA (753bp) protein (251aa)
ABC superfamily ATP binding cassette transporter, ABC protein bin=GWC2_Tenericute_34_14 species=Staphylococcus aureus genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
Amino acid ABC transport, ATP-binding protein
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
Ig5181_scaffold_70295_8
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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comp(8550..9239)
DNA (690bp) protein (230aa)
ABC-type transport system, permease component bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Amino acid ABC transporter, permease
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_70295_9
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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comp(9244..10050)
DNA (807bp) protein (269aa)
ABC-type transport system, substrate-binding component bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Amino acid ABC transporter, amino acid-binding protein
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_70295_10
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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10332..10559
DNA (228bp) protein (76aa)
Acyl carrier protein bin=GWA2_Tenericute_38_26 species=Ruminococcus albus genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
acpP; similar to acyl carrier protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_70295_11
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists


10651..13059
DNA (2409bp) protein (803aa)
leuS; Leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase bin=GWC2_Tenericute_34_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_70295_12
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

Not on your lists

13180..13692
DNA (513bp) protein (171aa)
ECF subfamily RNA polymerase sigma-70 factor (EC:2.7.7.6)
RNA polymerase sigma-70 factor, ECF subfamily Tax=Acholeplasma laidlawii (strain PG-8A) RepID=A9NF83_ACHLI
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_70295_13
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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13689..14801
DNA (1113bp) protein (371aa)
Hypothetical surface-anchored protein bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_70295_14
unknown

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14879..14998
DNA (120bp) protein (40aa)

This feature has no annotations

Ig5181_scaffold_70295_15
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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15153..15725
DNA (573bp) protein (191aa)
Hypothetical surface-anchored protein bin=GWF2_Firmicute_57_13 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hypothetical protein
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_70295_16
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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comp(15761..16321)
DNA (561bp) protein (187aa)
Methyltransferase bin=GWF1_Tenericute_35_14 species=Streptococcus mitis genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
hypothetical protein
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_70295_17
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(16311..17261)
DNA (951bp) protein (317aa)
Fe-S oxidoreductase, radical SAM superfamily bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_70295_18
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

Not on your lists

17313..17756
DNA (444bp) protein (148aa)
id=2828415 bin=GWF1_Tenericute_35_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
Tax=GWE2_Tenericutes_38_8_curated
Displaying 18 items

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