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Ig5181_scaffold_4734

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5181_scaffold_4734_1
Clostridium sp. CAG:307, Tenericutes, Bacteria

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1..525
DNA (525bp) protein (175aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:307.;"
thrB; Homoserine kinase (EC:2.7.1.39)
Homoserine kinase Tax=Clostridium sp. CAG:307 RepID=R7GHW5_9CLOT
Ig5181_scaffold_4734_2
Clostridium sp. CAG:307, Tenericutes, Bacteria

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539..1702
DNA (1164bp) protein (388aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase Tax=Clostridium sp. CAG:307 RepID=R7GHH4_9CLOT
Homoserine dehydrogenase {ECO:0000313|EMBL:CDE26595.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:307.;"
Ig5181_scaffold_4734_3
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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1696..2694
DNA (999bp) protein (333aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
Aspartate-semialdehyde dehydrogenase Tax=Coprobacillus sp. CAG:698 RepID=R5FQE0_9FIRM
asd; aspartate-semialdehyde dehydrogenase
Ig5181_scaffold_4734_4
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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2697..4004
DNA (1308bp) protein (436aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase Tax=Coprobacillus sp. CAG:698 RepID=R5FTY0_9FIRM
Ig5181_scaffold_4734_5
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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4316..4849
DNA (534bp) protein (178aa)
GNAT family acetyltransferase (EC:2.3.1.-)
Acetyltransferase, GNAT family protein bin=GWA2_Tenericute_38_26 species=Clostridium butyricum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_4734_6
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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4853..7423
DNA (2571bp) protein (857aa)
valS; Valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_4734_7
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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7416..8654
DNA (1239bp) protein (413aa)
Folylpolyglutamate synthase bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
folC; Folylpolyglutamate synthase
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_4734_8
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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8879..9475
DNA (597bp) protein (199aa)
ABC-type transport system, ATPase component bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
ABC transporter ATPase
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_4734_9
Acholeplasma brassicae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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9432..9938
DNA (507bp) protein (169aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma brassicae.;"
ABC-type transport system, ATPase component Tax=Acholeplasma brassicae RepID=U4KPH9_9MOLU
potA; ABC-type transport system, ATPase component
Ig5181_scaffold_4734_10
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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9931..10764
DNA (834bp) protein (278aa)
ABC-type transport system, permease component bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
potB; ABC-type spermidine/putrescine transport system, permease component
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_4734_11
Acholeplasma oculi, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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10761..11618
DNA (858bp) protein (286aa)
ABC-type transport system, permease component bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
potC2; Spermidine/Putrescine ABC transporter, permease PotC
Spermidine/Putrescine ABC transporter, permease PotC {ECO:0000313|EMBL:CDR31312.1}; species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma oculi.;"
Ig5181_scaffold_4734_12
Acholeplasma palmae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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11611..12027
DNA (417bp) protein (139aa)
ABC-type transport system, substrate-binding component bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
potD; putative ABC-type spermidine/putescine transport system, binding component
Putative ABC-type spermidine/putescine transport system, binding component {ECO:0000313|EMBL:CCV64659.1}; species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma palmae.;"
Ig5181_scaffold_4734_13
Acholeplasma laidlawii, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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11970..12731
DNA (762bp) protein (254aa)
ABC-type transport system, substrate-binding component bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
ABC transporter substrate-binding protein
ABC-type transport system, substrate-binding component {ECO:0000313|EMBL:ABX81881.1}; species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma laidlawii (strain PG-8A).;"
Ig5181_scaffold_4734_14
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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13098..14276
DNA (1179bp) protein (393aa)
Tryptophan synthase beta chain bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
trpB; Tryptophan synthase, beta chain
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_4734_15
unknown

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14329..14787
DNA (459bp) protein (153aa)

This feature has no annotations

Ig5181_scaffold_4734_16
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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14839..15561
DNA (723bp) protein (241aa)
Uncharacterized protein bin=GWA2_Tenericute_38_26 species=Bacillus pseudofirmus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_4734_17
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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15818..16951
DNA (1134bp) protein (378aa)
guaB; Inosine-5-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5-monophosphate dehydrogenase bin=GWA2_Tenericute_38_26 species=Erysipelothrix rhusiopathiae genus=Erysipelothrix taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_4734_18
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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16944..18380
DNA (1437bp) protein (479aa)
GMP synthase [glutamine-hydrolyzing] bin=GWF2_Tenericutes_35_184 species=Erysipelothrix rhusiopathiae genus=Erysipelothrix taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
guaA; GMP synthase large subunit
Tax=GWE2_Tenericutes_38_8_curated
Ig5181_scaffold_4734_19
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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18429..19112
DNA (684bp) protein (228aa)
DNA repair protein RadC bin=GWA2_Tenericute_38_26 species=Sporosarcina newyorkensis genus=Sporosarcina taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
radC; RadC protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_4734_20
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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19153..20106
DNA (954bp) protein (318aa)
Hypothetical membrane-anchored protein bin=GWC2_Tenericute_34_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
conserved hypothetical protein (UPF0283)
Tax=BJP_IG2102_Acholeplasmatales_34_18
Ig5181_scaffold_4734_21
Mollicutes bacterium HR1, Mollicutes, Tenericutes, Bacteria

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20237..21361
DNA (1125bp) protein (375aa)
tmpC; Membrane lipoprotein TmpC precursor
Membrane lipoprotein TmpC {ECO:0000313|EMBL:AIO19169.1}; species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR1.;"
Basic membrane lipoprotein bin=GWF2_Firmicute_51_9 species=Brachyspira pilosicoli genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
Ig5181_scaffold_4734_22
Mollicutes bacterium HR1, Mollicutes, Tenericutes, Bacteria

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21446..21871
DNA (426bp) protein (142aa)
xylG; Xylose import ATP-binding protein XylG (EC:3.6.3.17)
Xylose import ATP-binding protein XylG {ECO:0000313|EMBL:AIO19171.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AIO19171.1};; species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR1.;"
heme ABC transporter ATP-binding protein Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B30A73
Displaying 22 items

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