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Ig5181_scaffold_81369

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5181_scaffold_81369_1
RLO_RIF05_58_11, RIF5, Bacteria

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comp(3..1787)
DNA (1785bp) protein (595aa)
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
Ig5181_scaffold_81369_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1800..2357)
DNA (558bp) protein (186aa)
HTH-type transcriptional regulator PuuR Tax=Shinella zoogloeoides DD12 RepID=V5D2D1_9RHIZ
HTH-type transcriptional regulator PuuR {ECO:0000313|EMBL:EYR82980.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
aldehyde dehydrogenase
Ig5181_scaffold_81369_3
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(2578..3987)
DNA (1410bp) protein (470aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWF2_Lentisphaerae_57_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
transcriptional regulatory protein
Tax=GWF2_Lentisphaerae_57_35_curated
Ig5181_scaffold_81369_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4283..5026)
DNA (744bp) protein (248aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Integral membrane sensor signal transduction histidine kinase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7Y7_ANADF
integral membrane sensor signal transduction histidine kinase
Ig5181_scaffold_81369_5

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comp(5023..5673)
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL22716.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Ig5181_scaffold_81369_6
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(5869..6711)
DNA (843bp) protein (281aa)
Putative HTH-type transcriptional regulator yisR bin=GWF2_Lentisphaerae_49_21 species=Streptococcus canis genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Transcriptional regulator, AraC family
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Ig5181_scaffold_81369_7
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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6835..7668
DNA (834bp) protein (278aa)
Xylose isomerase domain-containing protein Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RQL8_SPITD
xylose isomerase domain-containing protein
Tax=RBG_16_Planctomycetes_55_9_curated
Ig5181_scaffold_81369_8
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

8018..8686
DNA (669bp) protein (223aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037F6E3C
alcohol dehydrogenase zinc-binding domain-containing protein
Tax=CG_Arma_02
Ig5181_scaffold_81369_9
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8744..10183)
DNA (1440bp) protein (480aa)
Type I phosphodiesterase/nucleotide pyrophosphatase Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EAX7_GEOBB
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ACH38838.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
Ig5181_scaffold_81369_10
unknown

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comp(10180..10380)
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 10 items

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