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Ig8144_scaffold_490

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Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig8144_scaffold_490_1
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238..867)
DNA (630bp) protein (210aa)
Sulfoxide reductase heme-binding subunit YedZ Tax=Rhodobacter sphaeroides RepID=A3PFT2_RHOS1
hypothetical protein
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;"
Ig8144_scaffold_490_2
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(867..1745)
DNA (879bp) protein (293aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain KD131 / KCTC 12085).;"
Sulfoxide reductase catalytic subunit YedY Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KQR8_RHOSK
putative sulfite oxidase subunit YedY
Ig8144_scaffold_490_3
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2005..2481
DNA (477bp) protein (159aa)
Nex18 symbiotically induced protein Tax=Rhodobacter sp. CACIA14H1 RepID=V7EJG7_9RHOB
Nex18 symbiotically induced protein {ECO:0000313|EMBL:ESW60110.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
beta-Ig-H3/fasciclin
Ig8144_scaffold_490_4
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2624..3667
DNA (1044bp) protein (348aa)
Putative ammonia monooxygenase Tax=Oceanibulbus indolifex HEL-45 RepID=A9E8I6_9RHOB
Putative ammonia monooxygenase {ECO:0000313|EMBL:EDQ04443.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indolifex HEL-45.;"
Conserved protein of unknown function, putative ammonia monooxygenase
Ig8144_scaffold_490_5
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3726..4685
DNA (960bp) protein (320aa)
hypothetical protein Tax=Wenxinia marina RepID=UPI00035FEE25
Wenxma_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ68990.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
2-hydroxyacid dehydrogenase
Ig8144_scaffold_490_6
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4706..5530)
DNA (825bp) protein (275aa)
ABC transporter permease Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B5F890
ABC-2 type transporter {ECO:0000313|EMBL:EEW24984.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
putative ABC-2 type transporter
Ig8144_scaffold_490_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5681..6475
DNA (795bp) protein (265aa)
3''''-5''''-bisphosphate nucleotidase Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B43209
3'(2'),5'-bisphosphate nucleotidase
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Ig8144_scaffold_490_8
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6472..7749
DNA (1278bp) protein (426aa)
glycosyl transferase Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B2E931
Glycosyl transferase family 2 {ECO:0000313|EMBL:EEW26501.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
glycosyl transferase family protein
Ig8144_scaffold_490_9
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7803..9713)
DNA (1911bp) protein (637aa)
Polysaccharide biosynthesis protein CapD Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PNN6_RHOS1
polysaccharide biosynthesis protein CapD
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ABN77952.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
Ig8144_scaffold_490_10
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9934..11847)
DNA (1914bp) protein (638aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B66FF8
Tax=GWF1_Rhodobacteraceae_65_7_curated
Ig8144_scaffold_490_11
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11868..12737)
DNA (870bp) protein (290aa)
Farnesyl-diphosphate synthase Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KP69_RHOSK
Farnesyl-diphosphate synthase
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:ACM02391.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain KD131 / KCTC 12085).;"
Ig8144_scaffold_490_12
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12734..12973)
DNA (240bp) protein (80aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
Exodeoxyribonuclease VII small subunit Tax=Rhodobacter sp. CACIA14H1 RepID=V7EMN6_9RHOB
exodeoxyribonuclease VII, small subunit
Ig8144_scaffold_490_13
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13121..13846)
DNA (726bp) protein (242aa)
Two component transcriptional regulator, winged helix family Tax=Rhodobacter sp. SW2 RepID=C8S5E4_9RHOB
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EEW23816.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
two component transcriptional regulator
Ig8144_scaffold_490_14
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13843..14352)
DNA (510bp) protein (170aa)
Transcriptional regulator, MarR family Tax=Rhodobacter RepID=B9KP73_RHOSK
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACM02395.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain KD131 / KCTC 12085).;"
Ig8144_scaffold_490_15
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14503..15369
DNA (867bp) protein (289aa)
Branched chain amino acid aminotransferase Tax=Rhodobacter RepID=B9KP74_RHOSK
branched-chain amino acid aminotransferase
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EKX58209.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. AKP1.;"
Ig8144_scaffold_490_16

Not on your lists

comp(15444..15629)
DNA (186bp) protein (62aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2AT60_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD59568.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Ig8144_scaffold_490_17
CG_Rhodob_01, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15731..16183)
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Rhodobacter sp. AKP1 RepID=L1KBM4_9RHOB
hypothetical protein
Tax=CG_Rhodob_01
Ig8144_scaffold_490_18
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16241..17206)
DNA (966bp) protein (322aa)
Epoxyqueuosine reductase bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
Ig8144_scaffold_490_19
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17292..17780)
DNA (489bp) protein (163aa)
PtsN protein {ECO:0000313|EMBL:ABA80342.1}; EC=2.7.1.69 {ECO:0000313|EMBL:ABA80342.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;"
PTS IIA-like nitrogen-regulatory protein PtsN Tax=Rhodobacter RepID=A3PNK5_RHOS1
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
Ig8144_scaffold_490_20
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17793..18368)
DNA (576bp) protein (192aa)
Sigma 54 modulation protein / SSU ribosomal protein S30P Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WW93_RHOS5
sigma 54 modulation protein/ribosomal protein S30EA
Sigma 54 modulation protein / SSU ribosomal protein S30P {ECO:0000313|EMBL:ABP71657.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
Ig8144_scaffold_490_21
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18615..19367)
DNA (753bp) protein (251aa)
ABC transporter related protein Tax=Rhodobacter sp. SW2 RepID=C8S5C6_9RHOB
ABC transporter related protein {ECO:0000313|EMBL:EEW23798.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
ABC transporter
Ig8144_scaffold_490_22
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19374..19910)
DNA (537bp) protein (179aa)
organic solvent tolerance protein OstA Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B6A9AF
OstA family protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
Ig8144_scaffold_490_23
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19910..20518)
DNA (609bp) protein (203aa)
hypothetical protein Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B4600F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKX58224.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. AKP1.;"
Ig8144_scaffold_490_24
CG_Rhodob_01, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20693..21307)
DNA (615bp) protein (205aa)
3''''-5'''' exonuclease Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B45825
3'-5' exonuclease
Tax=CG_Rhodob_01
Ig8144_scaffold_490_trna_4
unknown

Not on your lists

comp(21501..21582)
DNA (82bp)
transferRNA Leu
Ig8144_scaffold_490_25
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21743..22729
DNA (987bp) protein (329aa)
NADH dehydrogenase {ECO:0000313|EMBL:EEW23803.1}; EC=1.6.99.3 {ECO:0000313|EMBL:EEW23803.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
3-beta-hydroxy-delta(5)-steroid dehydrogenase Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B3882F
3-beta hydroxysteroid dehydrogenase/isomerase
Ig8144_scaffold_490_26
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22736..23539
DNA (804bp) protein (268aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565.;"
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
UDP pyrophosphate phosphatase Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B4B000
Ig8144_scaffold_490_27
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23700..25136
DNA (1437bp) protein (479aa)
dihydropyrimidine dehydrogenase subunit A Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B732B8
Dihydropyrimidine dehydrogenase subunit A {ECO:0000313|EMBL:ESW62358.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
putative oxidoreductase
Ig8144_scaffold_490_28
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25232..25945
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Rhodobacter sp. SW2 RepID=C8S5D4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW23806.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
hypothetical protein
Ig8144_scaffold_490_29
unknown

Not on your lists

25935..26318
DNA (384bp) protein (128aa)
hypothetical protein Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B4996B
Displaying items 1-30 of 184 in total

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