ggKbase home page

Ig8144_scaffold_2308

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig8144_scaffold_2308_1
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..726)
DNA (726bp) protein (242aa)
DNA polymerase I (EC:2.7.7.7)
5'-3' exonuclease Tax=Anaerostipes sp. 3_2_56FAA RepID=E5VUD3_9FIRM
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_2308_2
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(939..1799)
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1J8_CLOCD
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_2308_3
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1889..2479)
DNA (591bp) protein (197aa)
RNA polymerase sigma-24 subunit RpoE Tax=Firmicutes bacterium CAG:102 RepID=R5AMX0_9FIRM
RNA polymerase, sigma-24 subunit, RpoE
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2308_trna_1
unknown

Not on your lists

2631..2714
DNA (84bp)
transferRNA Leu
Ig8144_scaffold_2308_4
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2878..4251)
DNA (1374bp) protein (458aa)
MATE efflux family protein Tax=Clostridium botulinum RepID=B1IKZ7_CLOBK
MATE efflux family protein
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_2308_5
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4287..4727)
DNA (441bp) protein (147aa)
MarR family transcriptional regulator Tax=Clostridium sporogenes PA 3679 RepID=G9F5F7_CLOSG
MarR family transcriptional regulator
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_2308_6
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4966..5418)
DNA (453bp) protein (151aa)
Hydrolase, NUDIX family Tax=Lachnospiraceae RepID=C9L657_BLAHA
NUDIX hydrolase
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2308_7
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5538..6992)
DNA (1455bp) protein (485aa)
Peptidoglycan glycosyltransferase Tax=Clostridium hathewayi 12489931 RepID=N9WXN9_9CLOT
penicillin-binding protein transpeptidase
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_2308_8
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6937..8349)
DNA (1413bp) protein (471aa)
Putative cell division protein FtsW Tax=Roseburia sp. CAG:45 RepID=R6NV81_9FIRM
Bacterial cell division membrane protein
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2308_9
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8357..10744)
DNA (2388bp) protein (796aa)
hypothetical protein Tax=Orenia marismortui RepID=UPI00037C30B6
peptidase U32
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2308_10
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10878..11309)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Firmicutes bacterium CAG:56 RepID=R6CFE1_9FIRM
cell division protein ZapA
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2308_11
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11490..12062)
DNA (573bp) protein (191aa)
Regulatory protein MarR Tax=Halanaerobium hydrogeniformans RepID=E4RNK0_HALHG
MarR family transcriptional regulator
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2308_12
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12101..13132)
DNA (1032bp) protein (344aa)
Holliday junction ATP-dependent DNA helicase RuvB Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=RUVB_CLOPH
ruvB; Holliday junction DNA helicase RuvB
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2308_13
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13162..13824)
DNA (663bp) protein (221aa)
Holliday junction ATP-dependent DNA helicase RuvA Tax=Roseburia sp. CAG:45 RepID=R6PK59_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_2308_14
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13869..14429)
DNA (561bp) protein (187aa)
5-formyltetrahydrofolate cyclo-ligase Tax=Clostridium sp. 7_2_43FAA RepID=V9HBY2_9CLOT
5-formyltetrahydrofolate cyclo-ligase
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2308_15
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14447..14653)
DNA (207bp) protein (69aa)
UPF0291 protein BN593_01599 Tax=Clostridium sp. CAG:299 RepID=R6ZJR7_9CLOT
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2308_16
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14775..15758
DNA (984bp) protein (328aa)
Spore germination protein Tax=Paenibacillus mucilaginosus RepID=F8F7H7_PAEMK
spore germination protein
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2308_17
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15759..16553)
DNA (795bp) protein (265aa)
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase Tax=Lachnospiraceae RepID=C9L5S6_BLAHA
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2308_18
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16705..18312)
DNA (1608bp) protein (536aa)
FAD-dependent dehydrogenase Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J830_MARPK
FAD-dependent dehydrogenase
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_2308_19
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18315..19178)
DNA (864bp) protein (288aa)
Pyridine nucleotide-disulfide oxidoreductase family protein Tax=Clostridium sporogenes PA 3679 RepID=G9F4F1_CLOSG
pyridine nucleotide-disulfide oxidoreductase
Tax=BJP_IG2102_Clostridiales_34_350
Displaying 20 items

View Taxonomy