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07V140M03_2016_Ig8141_scaffold_3998

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_3998_1
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(346..1092)
DNA (747bp) protein (249aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000372FF0F
pseudouridylate synthase I
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(1474..2271)
DNA (798bp) protein (266aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035F60CB
ecfT; component of the influx ECF transporters
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(2321..3187)
DNA (867bp) protein (289aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036F2B16
ABC transporter
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_4

Not on your lists

comp(3172..4014)
DNA (843bp) protein (281aa)
polyamine-transporting ATPase (EC:3.6.3.31)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037718D7
Marine sediment metagenome DNA, contig: S01H1_C00540 {ECO:0000313|EMBL:GAF78882.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_3998_5

Not on your lists


comp(4464..4817)
DNA (354bp) protein (118aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036E078A
Marine sediment metagenome DNA, contig: S03H2_S15798 {ECO:0000313|EMBL:GAH68732.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rplQ; 50S ribosomal protein L17
07V140M03_2016_Ig8141_scaffold_3998_6
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(4819..5781)
DNA (963bp) protein (321aa)
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000365212E
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_7
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(5827..6459)
DNA (633bp) protein (211aa)
30S ribosomal protein S4 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036F0B5F
rpsD; 30S ribosomal protein S4
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_8

Not on your lists


comp(6735..7130)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00038195B3
Marine sediment metagenome DNA, contig: S01H4_C02506 {ECO:0000313|EMBL:GAG63015.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S11
07V140M03_2016_Ig8141_scaffold_3998_9

Not on your lists


comp(7159..7536)
DNA (378bp) protein (126aa)
30S ribosomal protein S13 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000362294E
Marine sediment metagenome DNA, contig: S01H4_S14678 {ECO:0000313|EMBL:GAH10975.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S13
07V140M03_2016_Ig8141_scaffold_3998_10

Not on your lists

comp(8009..8224)
DNA (216bp) protein (72aa)
translation initiation factor IF-1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037EDB00
Marine sediment metagenome DNA, contig: S03H2_S04131 {ECO:0000313|EMBL:GAH50443.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
infA; translation initiation factor IF-1
07V140M03_2016_Ig8141_scaffold_3998_11

Not on your lists

comp(8282..9040)
DNA (759bp) protein (253aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase Tax=Thermobrachium celere DSM 8682 RepID=R7RTX9_9CLOT
Marine sediment metagenome DNA, contig: S03H2_C00486 {ECO:0000313|EMBL:GAH21238.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_3998_12
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(9045..9695)
DNA (651bp) protein (217aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037D4F07
adenylate kinase
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_13
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(9887..11104)
DNA (1218bp) protein (406aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000372364C
protein translocase subunit secY/sec61 alpha
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_14

Not on your lists


comp(11105..11545)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000366CE1B
Marine sediment metagenome DNA, contig: S03H2_S11725 {ECO:0000313|EMBL:GAH67452.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rplO; 50S ribosomal protein L15
07V140M03_2016_Ig8141_scaffold_3998_15

Not on your lists


comp(11532..12074)
DNA (543bp) protein (181aa)
30S ribosomal protein S5 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037122A8
Marine sediment metagenome DNA, contig: S01H4_C03851 {ECO:0000313|EMBL:GAG62503.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S5
07V140M03_2016_Ig8141_scaffold_3998_16
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(12179..12553)
DNA (375bp) protein (125aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037F1251
rplR; 50S ribosomal protein L18
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_17
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(12786..13325)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036B963D
50S ribosomal protein L6
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_18
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(13575..13973)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037CF3D0
rpsH; 30S ribosomal protein S8
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_19
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(14652..15191)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003781625
LSU ribosomal protein L5P
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_20
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(15203..15535)
DNA (333bp) protein (111aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036680A9
rplX; 50S ribosomal protein L24
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_21

Not on your lists


comp(15554..15922)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036BA647
Marine sediment metagenome DNA, contig: S03H2_S08686 {ECO:0000313|EMBL:GAH57212.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L14
07V140M03_2016_Ig8141_scaffold_3998_22

Not on your lists


comp(15951..16172)
DNA (222bp) protein (74aa)
30S ribosomal protein S17 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036AA444
Marine sediment metagenome DNA, contig: S12H4_C02099 {ECO:0000313|EMBL:GAI67435.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S17
07V140M03_2016_Ig8141_scaffold_3998_23
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(16191..16397)
DNA (207bp) protein (69aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035D0604
ribosomal protein L29
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_24

Not on your lists


comp(16398..16820)
DNA (423bp) protein (141aa)
50S ribosomal protein L16 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037D30E7
Marine sediment metagenome DNA, contig: S12H4_C03344 {ECO:0000313|EMBL:GAI66061.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L16
07V140M03_2016_Ig8141_scaffold_3998_25
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(16804..17538)
DNA (735bp) protein (245aa)
30S ribosomal protein S3 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000375AD46
30S ribosomal protein S3
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_26
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(17539..17883)
DNA (345bp) protein (115aa)
50S ribosomal protein L22 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036D9DC2
rplV; 50S ribosomal protein L22
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_27
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(18032..18319)
DNA (288bp) protein (96aa)
30S ribosomal protein S19 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037B43E1
30S ribosomal protein S19
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_28
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(18345..19130)
DNA (786bp) protein (262aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000378DE69
rplB; 50S ribosomal protein L2
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_3998_29

Not on your lists


comp(19215..19502)
DNA (288bp) protein (96aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036FBE6E
Marine sediment metagenome DNA, contig: S01H1_S29696 {ECO:0000313|EMBL:GAG36521.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rplW; 50S ribosomal protein L23
07V140M03_2016_Ig8141_scaffold_3998_30
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(19502..20125)
DNA (624bp) protein (208aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037CFF1F
rplD; 50S ribosomal protein L4
Tax=RBG_19FT_COMBO_JS1_35_14_curated
Displaying items 1-30 of 33 in total

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