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07V140M03_2016_Ig8141_scaffold_6787

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t4_planktonic_scaffold_6787_trna_1
unknown

Not on your lists

31286..31367
DNA (82bp)
transferRNA Leu
07V140M03_2016_Ig8141_scaffold_6787_1

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381D41E
Marine sediment metagenome DNA, contig: S01H4_C04121 {ECO:0000313|EMBL:GAG66634.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GTPase-like protein
2019_SCN_bioreactor_t4_planktonic_scaffold_6787_trna_3
unknown

Not on your lists

comp(57190..57262)
DNA (73bp)
transferRNA Lys
07V140M03_2016_Ig8141_scaffold_6787_2
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(271..1578)
DNA (1308bp) protein (436aa)
gabT; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036C4232
Tax=CG_OP9-01
2019_SCN_bioreactor_t4_planktonic_scaffold_6787_trna_2
unknown

Not on your lists

comp(57337..57409)
DNA (73bp)
transferRNA Lys
07V140M03_2016_Ig8141_scaffold_6787_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(1664..2908)
DNA (1245bp) protein (415aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036D3A24
saccharopine dehydrogenase
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_6787_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(3523..4659)
DNA (1137bp) protein (379aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003708B90
putative L-lysine 6-dehydrogenase
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_6787_5
MPI_TA06_32_111, Bacteria

Not on your lists

comp(5149..6375)
DNA (1227bp) protein (409aa)
Uncharacterized protein Tax=Clostridium bolteae RepID=A8RQ28_9CLOT
aspartate aminotransferase
Tax=MPI_TA06_32_111
07V140M03_2016_Ig8141_scaffold_6787_6
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(6372..8561)
DNA (2190bp) protein (730aa)
putative aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036E16A3
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_6787_7
unknown

Not on your lists

comp(8747..8902)
DNA (156bp) protein (52aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_6787_8
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8953..9984)
DNA (1032bp) protein (344aa)
Uncharacterized protein Tax=Eubacterium limosum (strain KIST612) RepID=E3GPP8_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO38627.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
07V140M03_2016_Ig8141_scaffold_6787_9

Not on your lists

comp(10021..11079)
DNA (1059bp) protein (353aa)
ABC-type branched-chain amino acid transport system, permease component Tax=Cenarchaeum symbiosum (strain A) RepID=A0RWY0_CENSY
Uncharacterized protein {ECO:0000313|EMBL:KKL72215.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC-type branched-chain amino acid transport system, permease component
07V140M03_2016_Ig8141_scaffold_6787_10
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(11101..12015)
DNA (915bp) protein (305aa)
Branched-chain amino acid ABC transporter permease Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NBE6_9ARCH
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:BAJ49652.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
branched-chain amino acid ABC transporter permease
07V140M03_2016_Ig8141_scaffold_6787_11
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

Not on your lists

comp(12050..12757)
DNA (708bp) protein (236aa)
hypothetical protein Tax=candidate division YNPFFA RepID=UPI00035E6B30
branched-chain amino acid ABC transporter ATPase
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ACB07547.1}; species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
07V140M03_2016_Ig8141_scaffold_6787_12
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

Not on your lists

comp(12763..13521)
DNA (759bp) protein (253aa)
ABC-type branched-chain amino acid transport system, ATPase component Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L517_KORCO
branched-chain amino acid ABC transporter ATPase
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ACB07546.1}; species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
07V140M03_2016_Ig8141_scaffold_6787_13
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

Not on your lists

comp(13605..14825)
DNA (1221bp) protein (407aa)
ABC-type branched-chain amino acid transport system, periplasmic component Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L516_KORCO
branched-chain amino acid ABC transporter periplasmic protein
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ACB07545.1}; Flags: Precursor;; species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
07V140M03_2016_Ig8141_scaffold_6787_14
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14954..15961)
DNA (1008bp) protein (336aa)
proline racemase (EC:5.1.1.4)
Proline racemase Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYI9_THEOJ
Tax=RBG_16_Bathyarchaeota_57_9_curated
07V140M03_2016_Ig8141_scaffold_6787_15
unknown

Not on your lists

comp(16041..16226)
DNA (186bp) protein (62aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_6787_16
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(16746..18119)
DNA (1374bp) protein (458aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035CD84C
MmgE/PrpD
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_6787_17
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18366..19496)
DNA (1131bp) protein (377aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036A886D
isocitrate/isopropylmalate dehydrogenase
Tax=RBG_13_Actinobacteria_35_12_curated
07V140M03_2016_Ig8141_scaffold_6787_18
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19499..20002)
DNA (504bp) protein (168aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000363241E
3-isopropylmalate dehydratase small subunit
Tax=RBG_13_Actinobacteria_35_12_curated
07V140M03_2016_Ig8141_scaffold_6787_19
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19999..21258)
DNA (1260bp) protein (420aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036E5B94
homoaconitate hydratase family protein/3-isopropylmalate dehydratase, large subunit
Tax=RBG_13_Actinobacteria_35_12_curated
07V140M03_2016_Ig8141_scaffold_6787_20
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21271..21801)
DNA (531bp) protein (177aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381B788
metal dependent phosphohydrolase
Tax=RBG_13_Actinobacteria_35_12_curated
07V140M03_2016_Ig8141_scaffold_6787_21
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(21858..22199)
DNA (342bp) protein (114aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000364E734
hypothetical protein
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_6787_22
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(22233..23591)
DNA (1359bp) protein (453aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037767FA
Protein of unknown function (DUF1446)
Tax=CG_OP9-01
07V140M03_2016_Ig8141_scaffold_6787_23
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(23720..24409)
DNA (690bp) protein (230aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000377574D
GntR family transcriptional regulator
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_6787_24
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(24669..26507)
DNA (1839bp) protein (613aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037E681A
phosphoenolpyruvate carboxykinase
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_6787_25

Not on your lists

comp(26561..27943)
DNA (1383bp) protein (461aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003719A09
Marine sediment metagenome DNA, contig: S01H1_C00431 {ECO:0000313|EMBL:GAF77242.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
amidohydrolase
07V140M03_2016_Ig8141_scaffold_6787_26
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(28089..28760)
DNA (672bp) protein (224aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI000369ABEE
Asp/Glu/hydantoin racemase
Tax=RBG_13_Actinobacteria_35_12_curated
07V140M03_2016_Ig8141_scaffold_6787_27
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28841..30262)
DNA (1422bp) protein (474aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WV89_ANEAE
Displaying items 1-30 of 43 in total

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